Pedobacter cryoconitis: AY601_3997
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Entry
AY601_3997 CDS
T04341
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pcm
Pedobacter cryoconitis
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcm03400
]
AY601_3997
DNA repair and recombination proteins [BR:
pcm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AY601_3997
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
ChlI
AAA
AAA_16
AAA_24
AAA_22
Lon_C
AAA_5
nSTAND3
AAA_14
CobU
DUF7129
SLFN-g3_helicase
NTPase_1
ABC_tran
NACHT
DEAD
Rad51
KdpD
bpMoxR
ATPase_2
DUF7125
RNA_helicase
GvpD_P-loop
DZR
AAA_18
TackOD1
DAP3
Motif
Other DBs
NCBI-ProteinID:
AMQ00849
UniProt:
A0A127VIW4
LinkDB
All DBs
Position
4710126..4711502
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AA seq
458 aa
AA seq
DB search
MAKTKSAYFCQSCGYESAKWLGKCPSCNSWNTFVEEVIEKPGASVPAWQTSGSTKRSNKP
NKITNIAFSEENKLSTNDLELDRVLGGGLVAGSVVLIGGEPGIGKSTLMLQLALNITGKK
VLYVSGEESEQQIKMRAERITSNPTADCYILTETSTQNIFKQIEVLEPDIIVVDSIQTLH
SAHIDSTPGSVSQVRECTAELLRFAKETDTPVFLIGHITKDGAIAGPKILEHMVDTVLQF
EGDRHHVYRILRSIKNRFGAAAELGIYAMHSGGLRQVSNPSEILLSQRDEELSGIAIAAT
LEGARPMLIETQALVSTAAYGTPQRSATGFDTRRMNMLLAVLEKRCGFRLSTRDVFLNIA
GGIKVEDPAIDLAILAAIISSHEDIFISSKICFAAEVGLSGEIRAVNRIEQRIAEADKLG
FERIFVSNYNLKGLITDKYKLEITGVNKIEDVFSLLFG
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
ttggctaaaactaaatcagcatatttctgtcagagttgtgggtatgaatcagccaagtgg
cttggaaaatgcccatcctgtaattcctggaatactttcgtagaggaagttattgaaaaa
ccaggagccagtgttcctgcatggcaaacatccggttctacgaaaagatccaataaacct
aacaagattaccaacattgcgttttctgaggaaaataagctctccaccaatgatcttgaa
ctcgaccgggtactaggtggtggtttagtggccggatctgtagttttaatcggaggtgaa
ccgggtataggtaaatcaacactgatgctgcaacttgccttaaacattaccggaaagaaa
gtactctatgtttcaggcgaagaaagtgaacagcagattaaaatgcgcgcagaaaggatt
accagtaatccaaccgcagactgttatatccttactgaaacctccacacagaatatcttt
aagcaaattgaggtgcttgaacccgatattattgtagtagattccatccagacacttcat
tctgcacatattgattctacaccaggcagtgtttctcaagtaagggaatgtactgctgaa
ttgctgcgtttcgccaaagaaacggatactccggtctttttaatcggtcatattaccaaa
gatggagcgattgcggggcctaaaatcctggaacacatggttgacaccgttttacaattt
gaaggcgacagacatcatgtttacagaattctacgttctattaaaaacagatttggtgcc
gcagcagaattaggcatttatgccatgcacagcggtgggctcagacaagtttccaatcct
tcggaaattttgctttctcaaagagatgaggaattaagtggtattgccattgcagcgact
cttgagggtgcaaggccaatgttaattgaaacacaggccttggttagcactgcagcttac
ggaacgcctcagcgttcagctacgggctttgatacccgaagaatgaatatgctccttgcc
gtactggaaaagcgatgtggctttaggttaagtacaagagatgtattcttaaatattgct
ggtgggattaaagtggaagatcctgcaattgaccttgcgattcttgcggccattatttca
tcacatgaggatattttcatctcttcaaaaatttgttttgcggcagaagttggtttatca
ggagaaatccgcgcagtaaacagaatagaacagcggattgctgaagctgacaagctggga
tttgaaaggatttttgtttctaattataatttaaaagggctgattacagataaatataaa
ctggagattacaggcgtgaacaaaattgaagatgtcttttcattattgttcgggtaa
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