KEGG   Pedobacter cryoconitis: AY601_4111
Entry
AY601_4111        CDS       T04341                                 
Name
(GenBank) hypothetical protein
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pcm  Pedobacter cryoconitis
Pathway
pcm03030  DNA replication
pcm03430  Mismatch repair
pcm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pcm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AY601_4111
   03430 Mismatch repair
    AY601_4111
   03440 Homologous recombination
    AY601_4111
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pcm03032]
    AY601_4111
   03400 DNA repair and recombination proteins [BR:pcm03400]
    AY601_4111
Enzymes [BR:pcm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AY601_4111
DNA replication proteins [BR:pcm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AY601_4111
DNA repair and recombination proteins [BR:pcm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AY601_4111
SSDB
Motif
Pfam: RNase_T RNase_H_2
Other DBs
NCBI-ProteinID: AMQ00962
UniProt: A0A127VI69
LinkDB
Position
complement(4813694..4814458)
AA seq 254 aa
MSLKFSRPIAFFDIEATGLDTTKDRIVELAICKIHPDFSRESFSWLINPEMPIPAKASAI
HGIYDQDITNEPTFAKLSAHIWHILDNCDFGGFNSNRYDIPMLYNEFLRTGKTIDYSSIR
FIDAGAIFKRQEERTLSAAVKFYLGYEMVDAHAADADIEATVDVFEAMLQKYKDLPQNME
GMHLFCNYDKPVMDLSGKFTIDDEGDIIFNFGSKRGNKAKYDIGHLQWMYGKDFAPDTKR
ICEKLLGINQQHYS
NT seq 765 nt   +upstreamnt  +downstreamnt
atgagtttaaaattcagtaggccgatagccttctttgatatagaagcgaccggtttagat
accacaaaagacagaatagttgaattagctatctgcaaaattcatcctgatttctctcga
gagtcgttctcctggttgatcaatcctgaaatgcctatccctgcgaaagcttcagctatc
catggtatatatgatcaagatattaccaacgaaccaacattcgcgaaattgtcagcacat
atatggcatatccttgataactgtgatttcggaggcttcaatagcaataggtatgatatt
ccaatgctttacaatgagttcctgagaactggtaaaaccatcgactatagcagcatcagg
tttatagacgctggtgctatattcaaacgacaggaagaacgcacattgtccgcagcagtt
aaattctatttgggatatgaaatggttgatgctcacgccgcagatgctgacattgaggct
acggttgatgtatttgaagctatgctgcagaagtataaagatctccctcagaatatggaa
ggtatgcatcttttctgcaattacgataagccagtaatggatctgtcaggcaagttcact
atcgatgatgaaggtgatatcatattcaattttggcagcaagagaggtaataaagctaag
tatgatattggtcacctccaatggatgtatggcaaagatttcgcaccagatacaaagaga
atctgcgaaaagctcctcggaattaatcaacaacattattcataa

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