Pedobacter cryoconitis: AY601_4126
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Entry
AY601_4126 CDS
T04341
Name
(GenBank) Methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm00450
Selenocompound metabolism
pcm00970
Aminoacyl-tRNA biosynthesis
pcm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
AY601_4126
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AY601_4126
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pcm01007
]
AY601_4126
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcm03016
]
AY601_4126
Enzymes [BR:
pcm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
AY601_4126
Amino acid related enzymes [BR:
pcm01007
]
Aminoacyl-tRNA synthetase
Class I (U)
AY601_4126
Transfer RNA biogenesis [BR:
pcm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
AY601_4126
Prokaryotic type
Other AARSs
AY601_4126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
Anticodon_1
tRNA-synt_1e
DZR
Zn_ribbon_13
Motif
Other DBs
NCBI-ProteinID:
AMQ00977
UniProt:
A0A127VI36
LinkDB
All DBs
Position
complement(4823725..4825833)
Genome browser
AA seq
702 aa
AA seq
DB search
MDNSKIKRYTVTAALPYTNGPVHIGHLAGVYLPADTYVRYLRSNKRDVKFICGSDENGVP
ITLKAKKEGVTPQVVVDKYHKIIGDSFKEFGVSFDIYHRTSSEMHHETASDFFKTLYDKG
IFTEEVTEQYYDVKAQSFLADRYITGTCPKCGNENAYGDQCENCGSTLNATDLINPKSTL
SGEPPVRRKTKNWFLPLEKYEEQLRTYIESHKEWKPNVAGQCQSWLNAGLQPRAMTRDLD
WGVKVPVKDAEGKVLYVWFDAPIGYISATKELFRYAGAEGKNPKADEYYLKKDNVVEGKW
EDYWKDDTTKLVHFIGKDNIVFHCIIFPAMLMAHGDYILADNVPANEFLNLEGQKISTSK
NWAVWLNEYLVEFKDKQDVLRYVLTSTAPETKDNDFTWKDFQARNNNELVAVLGNFINRV
VVLTHKYFEGKVPELMTLNEQDQQVIDELALYPSKISASIENYRFREALTEVMNVARLGN
KYLAETEPWKVIKTDEDRVKTILNISLQIVAGLEILIEPFLPFTAEKLRGMLNHEAHLWG
DAGKIDLLQPGHQLNEAALLFEKVEDTDVQAQIDKLNQSKVDNIAANVVVAPAKENIDFD
QFSAMDIRVATIIAAEKVEKTKKLLKLTLDTGLDERTVVSGIAEYFTPEEVVGQQVSLLI
NLAPREIKGILSQGMILMSENSDGKLTFVSPLQNHVSGSVIR
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
ttggataacagtaagataaaaagatataccgttacggcggctttaccctatacgaatggt
ccggtacacattgggcatttagctggtgtttatttgcctgctgatacttatgtacgttac
cttcgttcaaataaaagagatgttaaatttatttgtggttctgatgagaatggtgtacct
attacattaaaggccaaaaaagaaggtgttactccacaggttgttgttgataaatatcat
aaaatcataggggattcttttaaagagttcggtgtatcttttgatatctatcaccgtact
tcttctgaaatgcatcatgaaactgcatctgatttctttaagaccctttacgataagggc
atttttacggaagaagtaacggagcagtattatgatgtgaaagcacagtctttccttgct
gatcgttatatcaccggaacttgtccgaagtgcggaaacgaaaatgcttatggtgatcag
tgtgagaattgcggaagtacgctgaatgcaactgacctgattaatccgaagtcaacttta
tctggcgagcccccggtccgcagaaagacaaaaaactggttcttaccattagagaaatac
gaagagcaattaagaacttatattgaaagccacaaagagtggaagccaaatgttgctggt
cagtgtcaaagctggttaaacgcaggtttacagccaagagcgatgaccagggatctggac
tggggcgttaaggttccggtaaaagatgctgaaggcaaagttttatatgtttggtttgat
gctccgattggttatatctcagcgacaaaggaattgttccgttatgctggtgcggaaggt
aaaaatcctaaggctgatgaatattacctgaaaaaggataatgtagtagaggggaaatgg
gaagattactggaaggacgatacgaccaagctggtacatttcattggaaaagataatatt
gtattccattgtatcattttcccggcgatgttaatggcgcatggggattatattcttgct
gacaatgttcctgcaaatgaattcctgaatttagaagggcagaagatttctacgtctaaa
aattgggcggtatggttgaatgagtacctggttgagtttaaggataaacaggatgtattg
cgttatgttttgacttcgactgcgcctgaaaccaaggataatgattttacctggaaagat
tttcaggctagaaataataatgagttagttgctgtattaggcaatttcatcaatagggtg
gttgtattgacgcataagtattttgaaggcaaggtgcctgagctaatgacgttaaatgag
caagatcagcaggtgattgatgaactggctttatatccttcaaaaatcagcgcttctata
gagaattacaggtttagagaggcgttaactgaggtgatgaatgtagcacgtttaggaaat
aaatatctggctgagactgagccatggaaggttattaaaactgatgaagacagggtaaaa
actattttaaatatcagtttgcagattgttgctggtctggagattttaatagaaccattt
ttaccattcacggcagagaagttaagaggaatgttaaaccacgaggctcatttgtgggga
gatgccggtaagatagatttattgcagccaggtcaccagctgaatgaagctgctttgtta
tttgaaaaggttgaagatactgatgttcaggctcagattgacaagttaaaccagagtaaa
gttgataatatagcggctaatgtagtggtagctcctgctaaagagaatatagatttcgat
cagtttagtgcgatggatatccgtgtagcgacaataatcgctgctgagaaggtagagaag
acgaagaagttgttaaagcttactttggatacaggtttggatgagcgtacggttgtttca
ggaattgcggagtattttactccagaagaagtagttggtcagcaggttagcttattgatc
aatcttgctccgagagaaattaaaggtattttatctcagggaatgattttaatgtctgaa
aattcagatggaaaacttacttttgtgtcgcctttacaaaaccatgtgagtggaagcgta
atcaggtag
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