Pedobacter cryoconitis: AY601_4134
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Entry
AY601_4134 CDS
T04341
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm00300
Lysine biosynthesis
pcm00550
Peptidoglycan biosynthesis
pcm01100
Metabolic pathways
pcm01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AY601_4134
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AY601_4134
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
AY601_4134
Enzymes [BR:
pcm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
AY601_4134
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AMQ00985
UniProt:
A0A127VI31
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Position
4840755..4842056
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AA seq
433 aa
AA seq
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MSQIESIYQHYLSNPVICTDTRNISAGCLFFALKGEHFDANTFAAEALKQGAAYAIIDNE
EYLINDSCLLVEDVLTALQDLARHHRTQLHIPIIGLTGSNGKTTTKELINAVLSAQYKTF
ATKGNLNNHIGVPLSILAIAPDTEIAVIEMGANHQKEIEFLCTIAQPTHGMITNIGMAHL
DGFGGFEGVKKGKAELFTYLKNTDGIAFINRDNPYIMEMSSVAQLAHLVYYGTVGENFVS
GQLLKSDPLIELSWKKQQEAFKAQANLTGAYNFENILAAICIASFFELSPDQVNKGLAAY
FPNNNRSQLTKTATNTVICDFYNANPSSMTAALGNISILEAKNKVAIIGDMFELGPETEE
QHNLIAALAEKSGLDTVILIGKHFYALKDKFEGLFFNTPKETEAWLKENPVTDSLVLLKG
SRGMALEQLLPVL
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaattgaatctatttatcaacactacctgtcaaatccggtgatctgtactgac
accagaaatattagtgcaggctgtttgttcttcgcgctgaaaggagagcatttcgatgcc
aatacatttgcagcagaagctttaaaacaaggtgctgcctatgcgattatagacaatgag
gaatatctgattaatgactcctgtttattagttgaagatgtcttaactgctttgcaggat
ttagcccgtcaccaccggacgcagcttcatatccctattattggcctgacagggagcaac
ggaaaaacaaccaccaaagaactgatcaatgcagtactgagtgcgcaatataaaaccttt
gctacaaaagggaacctgaataatcatattggtgttcctttatcaattttagctattgca
ccagatacagagatcgctgtgattgaaatgggtgccaatcaccaaaaagagattgagttt
ttgtgcactattgcccagcctacccatggaatgattacgaatatcgggatggctcacctg
gatggatttggaggttttgaaggcgtaaaaaaaggaaaagccgagttattcacttatctc
aaaaacacggatggtatagcttttataaacagagacaatccatatattatggaaatgagc
agtgttgcgcaattagctcacctggtttattacggaaccgtaggggaaaacttcgtgtcc
ggacaacttttgaaatcagatccgctgattgagttaagctggaaaaaacagcaggaagct
tttaaagctcaggccaacctgacaggggcttataattttgagaatatcctggcagcaatt
tgtattgcatctttctttgagcttagtccagatcaggttaataaaggcttagcagcatat
tttccgaacaataaccgctcacaattgactaaaacggccacgaataccgtcatctgcgac
ttctataatgctaatccaagcagtatgactgcagcgcttggcaatatctctatcctcgaa
gccaaaaacaaagttgctatcattggggatatgtttgaactgggtccggaaactgaagag
caacataatttgatagccgctttggcagaaaaatcagggttagataccgtcattttaatc
ggcaagcatttttacgcgctaaaagacaagtttgaagggctgttttttaatacgccaaag
gaaactgaagcctggttaaaagagaatcctgtaacagatagccttgttttactgaaaggt
tcaagagggatggctttagagcagttattgccagtcttgtaa
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