Pedobacter cryoconitis: AY601_4342
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Entry
AY601_4342 CDS
T04341
Name
(GenBank) S1 RNA-binding domain protein
KO
K06959
protein Tex
Organism
pcm
Pedobacter cryoconitis
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
AY601_4342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
Tex_N
HHH_3
HHH_9
S1
HHH_7
YqgF
S1_RRP5
T2SSK
HHH_2
HHH_6
RuvC
HNF-1_N
Motif
Other DBs
NCBI-ProteinID:
AMQ01189
UniProt:
A0A127VJV5
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Position
5061716..5064025
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AA seq
769 aa
AA seq
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MNNHSKIIAAELAVSEKQVIATIELLDEGATVPFISRYRKEVTGSLDEVQVAAVRDRFQQ
LRELDKRREAILKALTTLGKLTPELEAQLNAAENITTIEDIYLPYKPKRKTRASEARRKG
LEPLALLIFEQGKLNPDEEAAKYLNTELGVENTEEALAGARDIIAEMINENAEVRTDMRQ
YFQQKAIMKSSVIKGKEEEGIKYKDYFEWQESVKSAPSHRVLAMRRGENESILKLEAMPE
EDGAIAILEKQIIQGNGAASKQVELALHDCYKRLLGPAMETELRLLAKQKADEEAIRVFA
ENARQLLLAAPMGQKNVLAVDPGFRTGCKVVCLDRQGKLVENTTIYPHTGQGNIKNAADA
IQKLCVKHEVEAIAIGNGTAGRETETFIRGLNLQGVLIVMVNENGASIYSASEVAREEFP
TQDITVRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQHDVDQTKLQQSLDDTVISCVNAV
GVELNTASKQVLAYVSGLGPQLAQNIVTYRNEHGAFKNRESLKKVPRLGDKAYEQAAGFL
RIRDAAMVLDASGVHPERYALVNQMAKDLGHSVDELLKDVKLQKQIKLPQYISENVGLPT
LNDIMKELAKPGRDPREAFEAFSFTDGVNEINDLKVGMKLWGIVTNITNFGAFVDIGVHQ
DGLVHTSQLADKFVANPNDVVKVSQKVEVTVKEIDVVRKRISLSMKSENAAKPAARAKVE
RPATQRKPENNRAEPANRSQHNKPKPQQAKVQPEGDLQMKLEALKNKFK
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgaataatcactcaaagattattgctgcagaactagcagtctcagaaaaacaggttatt
gcaactattgaattattagatgaaggagcgactgtaccttttatttcccgttaccgtaaa
gaggtgaccgggagtttagatgaggtacaggtagctgcggttcgtgaccgtttccagcaa
ctacgtgagttagacaaaagacgtgaggctattctgaaagcactgaccacgctgggtaaa
ttaacgccagagcttgaagctcagcttaatgcagctgaaaacatcacaactattgaagac
atctatcttccttataaaccaaaaaggaaaacaagagcttctgaagccaggcgtaaaggt
ttggagcctttagcactgctaatttttgaacagggtaaattaaaccctgacgaagaagcg
gctaaatatctgaatacagagcttggtgtggagaatacggaagaagctttggcgggtgca
agagatattattgcagaaatgatcaacgaaaatgcagaagtccgtacagacatgcgtcag
tattttcagcagaaagcaatcatgaagtcttctgtaattaaagggaaagaagaagagggg
ataaaatataaggattatttcgagtggcaagaatcagtaaaatctgcaccttctcaccgt
gttttagcaatgagacgcggcgaaaatgaatctatactgaaattagaggctatgcctgaa
gaggatggtgcgattgcaattttggaaaagcagattattcaagggaatggtgctgcttct
aaacaagtagaattggccttacatgactgttacaaacgtctgttaggcccggcaatggaa
acagaacttcgcttgttagctaaacaaaaagcagatgaagaagcaatccgtgtatttgcc
gaaaatgcaaggcaattattactggctgcaccaatgggccagaaaaatgtgttagcagtt
gatccgggtttccgtacaggttgcaaagtggtatgcctggacagacagggtaaattagta
gagaatacaacaatctatccgcatactggacaaggaaatataaaaaatgctgcggatgcg
atccaaaaactttgtgttaaacatgaagtggaagctattgcgattggaaatggtaccgca
ggaagagaaactgagacttttatcagaggattaaacttgcaaggtgttctgattgtaatg
gtgaatgaaaatggtgcttctatttattctgcatcagaagttgcccgtgaagaatttcca
actcaggatattactgtgcgtggtgctgtttcaattggccgcaggttaatggatcctttg
gctgaattggttaaaattgatcctaaatctattggagttggacaatatcagcacgatgta
gatcagactaagcttcagcaatcgctggatgataccgtaataagttgtgtaaacgcagtt
ggtgtggaattaaatacagcttcaaaacaagttttagcctacgtttctggattaggaccg
cagttggcacaaaatattgtgacttatagaaatgagcacggtgcgttcaaaaatcgtgag
agtttaaagaaagttccacgtttaggagataaggcttatgagcaggcggctggtttctta
agaatcagagatgcggctatggtattggatgcaagtggtgttcacccggagcgttacgct
ttggtgaatcagatggctaaagatttaggtcattctgtagacgagcttttaaaagatgta
aagcttcagaagcagatcaagttgccgcaatatattagtgaaaatgtgggtttacctaca
ttaaatgatatcatgaaagaattagctaaacctggaagagatcccagggaagcttttgag
gcattcagttttacggatggtgtgaatgagattaatgatttaaaggtaggtatgaagtta
tggggtattgtaactaacattaccaattttggtgcttttgttgatataggtgtacatcag
gatggtttagtccataccagtcagttagctgataaatttgtggctaatcctaatgacgta
gttaaagttagccagaaggtagaagtgaccgtcaaagagattgatgtggtacggaaacgt
atttctttatctatgaaaagcgaaaatgcagctaaacctgctgcacgtgctaaagtagag
cggcctgctacccagagaaagcctgaaaacaacagggctgaaccggccaatagatctcag
cataacaaaccaaagcctcagcaagcaaaagtacaaccggaaggtgatttgcaaatgaag
ctggaagctttgaaaaataagtttaaataa
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