Pedobacter cryoconitis: AY601_4370
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Entry
AY601_4370 CDS
T04341
Name
(GenBank) hypothetical protein
Organism
pcm
Pedobacter cryoconitis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_8
TPR_2
TPR_11
TPR_17
TPR_19
TPR_16
TPR_12
TPR_14
CFAP70_TPR_C
ANAPC3
TPR_6
TPR_9
TPR_7
ARM_TT21_C
TPR_CcmH_CycH
RMD1-3
TPR_10
CFAP70_mid_TPR
ARM_TT21_5th
ChAPs
FAT
PRP6_TPR
TPR_Psidin_N
TPR_YpiA_C
TPR_15
TPR_21
ARM_TT21_4th
HAT_PRP39_N
Consortin_N
Motif
Other DBs
NCBI-ProteinID:
AMQ01213
UniProt:
A0A127VIT1
LinkDB
All DBs
Position
5097643..5099046
Genome browser
AA seq
467 aa
AA seq
DB search
MEEEFYFDFSDDAQRSVERYEEMIRNQDQYFFDAQAFENIIDYYIEKSDPVKALQVIEYA
LNQHPYAAVFLIKQAQLLFVTDQIDKAFFSLQKAEMLEASESEIYVLRGNIYNSLERFTE
ALDNFQIALTFAETTDEILLQIAYVYQNMLDYESAIKYIKLSLEQNMENKDGLYELAFCY
DILDKQEESIQFYMEYIDNDPYSYAAWYNLANSYHKLDLFEKAIDAYDYAILIKDNFASA
YYNKGNALVQLDRYAEAIEVYKQTWEYEQPNADTYCAIGECYEKLERMDEARAYYKKSVK
MDNKLADAWFGIGVTLNFEERYFESLHFYKKAIELDDENPDFWFAMADAYYKLGQIEQSV
EAYYKVLEYNPLDIEAWLDFSTVLYEQGRLLEASETISDGIKNNPDAAELYYRQVAYLFA
LGQHKEALVYLETALVTDPDKHYILFEYLPQLQDNNAIVEVINRYIK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggaattttactttgattttagtgatgatgcgcagcgttcggtagagcgttac
gaagagatgataaggaaccaggatcagtatttttttgatgcccaggcttttgagaacatc
attgactactatatagaaaagagtgaccccgtaaaggcacttcaggtgatagagtatgcc
ctaaaccagcatccatacgccgcagtttttttaattaaacaagcgcagcttcttttcgtt
actgatcagatagacaaagcatttttctctttgcaaaaagcagaaatgctcgaagcctca
gaatcagaaatctatgtgcttcgtggaaacatatacaatagcctggagcgttttaccgaa
gcattggataactttcagattgcattgacattcgcggaaactacagatgaaattctgctt
cagatcgcttacgtttatcagaatatgctggattacgaaagtgccatcaagtatatcaaa
ctgagtctggaacaaaatatggagaacaaagacggtttgtatgaactggctttctgttac
gatattttagacaaacaagaagaaagtatccagttttacatggaatatatcgataacgat
ccttattcttatgctgcatggtataacctggctaactcttatcataaacttgatctgttt
gaaaaggcgatcgatgcgtatgattatgcaatcctgattaaagataattttgcttcagct
tattataacaaaggaaatgcactggttcaacttgaccgttatgccgaggctatagaagtc
tataaacaaacctgggaatatgaacagccaaatgcagatacttattgcgcaataggggaa
tgttatgaaaagctggaacgtatggatgaagcacgtgcctactataaaaaatccgtgaag
atggataataagctggccgatgcctggtttggaataggagtgacactgaattttgaggaa
cgctattttgaatcgctgcacttttataagaaagcgatagagctggacgatgaaaatcct
gacttctggtttgcaatggctgatgcttattataaactcggacaaatagagcaatctgtt
gaagcctattataaagtgctggaatataacccgcttgacatagaggcatggctggatttc
tctactgttctttatgagcagggaaggctgttggaagcctcagaaactatttctgacgga
atcaagaataacccggatgctgcagagctttattacagacaggtggcttatttatttgcc
ctcggacaacataaagaggcactggtttacctggagacagctttagtgactgatccggac
aaacattatatcttgtttgaatacctgccgcagttacaggataacaatgcaattgttgaa
gtcatcaacagatatattaaatag
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