Pedobacter cryoconitis: AY601_4548
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Entry
AY601_4548 CDS
T04341
Name
(GenBank) epimerase
KO
K17947
dTDP-L-rhamnose 4-epimerase [EC:
5.1.3.25
]
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm00523
Polyketide sugar unit biosynthesis
pcm01110
Biosynthesis of secondary metabolites
pcm01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
AY601_4548
Enzymes [BR:
pcm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.25 dTDP-L-rhamnose 4-epimerase
AY601_4548
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Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
RmlD_sub_bind
adh_short
KR
NmrA
NAD_binding_2
Ribosomal_S18
Motif
Other DBs
NCBI-ProteinID:
AMQ01386
UniProt:
A0A127VJ79
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Position
5290389..5291525
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AA seq
378 aa
AA seq
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MKNILITGGAGFIGSNLALKLIDKGYTLTVLDNLSPQIHGENPYETSPLYKSIEGKVKFI
KGSVTDKSAWEEALEGQDAVVHYAAETGTGQSMYEIHKYVDVNINGTALMLDILANSKAH
NVKKVIVASSRSIYGEGKYESPEYGIVYPLHRKDDFMSKGDYDVKYKDSSDLTLLATDEE
SKIHPSSVYGITKQNQEQMVMTVCPTIGISAVAFRYQNVYGPGQSLKNPYTGILSIFSTQ
IKNGNTINIFEDGKESRDFVFIDDVVDATILGLEKDEANNEVFNVGTGVATDVMTVANSL
VDCYKINVPINITGNYRLGDIRHNFADLNKIGTKLGFQPKVMFAEGIQKFTAWVNKQDIE
EDNYSKSIEEMKEKGLFK
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatatattaataactggtggagcaggttttataggctcgaacctggcactaaaa
cttatagataagggatacactcttacagtattagataacctttctcctcagatacatggt
gagaatccatatgaaacatctccattatataaaagtatagaaggaaaagttaaatttatt
aaaggttccgtaactgataagtcggcttgggaagaagcattggaaggtcaggatgctgta
gtacactatgccgcagaaacgggtactggtcagtccatgtatgaaatacataagtatgta
gatgttaatattaacggtactgcgttaatgttggatattttggcaaatagtaaagctcat
aacgtaaaaaaggttattgttgcttcttcaaggtcaatttatggagagggcaaatatgaa
agtccggagtatggaattgtttatccgttacatcggaaagacgattttatgtcaaagggc
gattacgacgtaaaatataaagatagttctgatttaacactgctggcgactgatgaagag
tccaaaatacacccttcttcagtttatgggattacaaaacaaaaccaggaacaaatggtg
atgacggtttgtcctaccattggtatttcagcagttgctttcaggtaccaaaatgtatat
ggcccgggtcagtcactcaaaaatccttataccggaatactctcaattttctctacgcaa
atcaaaaatggtaataccatcaatatctttgaagatggtaaagaaagccgggattttgta
tttattgatgatgtagtagatgctacaattttgggactggaaaaagacgaagctaacaat
gaagtttttaatgttggaactggtgtggcaactgatgtgatgacagtggcgaattcctta
gtagattgttataaaatcaatgtaccaattaatattacaggtaattacagacttggtgat
atcagacataattttgctgatttaaataagattgggactaaacttggatttcaaccaaaa
gtgatgtttgctgaaggaattcaaaaatttactgcatgggtaaataaacaggatattgag
gaagataactattcaaaatccatagaagaaatgaaagaaaaggggctctttaaatga
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