Pedobacter cryoconitis: AY601_4580
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Entry
AY601_4580 CDS
T04341
Name
(GenBank) 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
pcm
Pedobacter cryoconitis
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcm03009
]
AY601_4580
Enzymes [BR:
pcm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
AY601_4580
Ribosome biogenesis [BR:
pcm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AY601_4580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RlmN_N
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
AMQ01417
UniProt:
A0A127VJB8
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All DBs
Position
complement(5327954..5329024)
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AA seq
356 aa
AA seq
DB search
MLVTTKTDIRSLSLIQLQQHFTEMKEPAYRAKQVYQWLWEKSARSFEEMSNLSKDLRKKL
DENYTINAVEVNNTQFSNDQTIKNTFRLFDGNIVEGVLIPMEERMTACVSSQVGCSLSCK
FCATGYMDRKRNLNADEIYDQVVLIDQQAKKNYNAPLTNIVYMGMGEPLLNYANVMKSIE
RITAPDGLNMSYKRITVSTAGIAKMIRKLADDGAKFNLALSLHAADDKKRNEIMPINEQN
TLKVLAEALKYYFAKTKNPVTYEYIVFNNFNDELQDAIDLAKFCKHVPCKVNLIEYNPIQ
FADFINAEGDKIDAFSNYLKSQGVNTNIRRSRGKDIDAACGQLAVKNQPETEISAN
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgctagtaacaactaaaactgatatccgttctctgagtcttatccagcttcagcagcac
ttcactgagatgaaagaacccgcataccgggccaaacaggtttaccaatggctttgggaa
aaatctgcgcgttcttttgaagaaatgagtaacctgtctaaagacctgagaaagaaactg
gacgagaactataccatcaatgcagttgaggtcaacaatacacaattcagtaacgaccaa
accattaaaaataccttccgtttatttgatggaaacatcgttgaaggcgtactgattcca
atggaagaacggatgactgcctgcgtaagctctcaggttggttgcagcttatcctgtaaa
ttctgtgcaacaggttatatggatagaaaacgtaacctaaacgccgatgaaatttatgat
caggtggtactgattgatcagcaggccaaaaagaactacaatgccccactgaccaatatc
gtttatatgggtatgggagagccgttattaaactatgcaaatgtgatgaaatcaatagag
cggattactgctcctgatggattaaacatgtcatacaagagaattactgtttctacagca
ggtattgctaaaatgatcaggaaactggcagacgacggggctaaatttaaccttgcacta
tccctgcatgctgctgacgacaaaaagagaaatgaaattatgcctatcaatgagcaaaat
actttaaaagtacttgcagaggccttaaaatactatttcgccaaaacaaagaaccccgtt
acctacgaatatattgtcttcaataactttaatgacgaacttcaggatgctatagatctg
gctaaattctgtaaacacgtaccctgcaaagtaaacctgattgaatataacccaattcag
tttgcagatttcatcaatgcagaaggagataaaattgacgctttctcgaattacctgaaa
agccagggtgtgaatacaaatatcagacgtagccgcggtaaagatattgatgctgcctgt
ggacagcttgctgtaaaaaaccagccagaaacagaaatatcagctaactaa
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