Pedobacter cryoconitis: AY601_4691
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Entry
AY601_4691 CDS
T04341
Name
(GenBank) Deoxyribodipyrimidine photolyase-class I
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pcm
Pedobacter cryoconitis
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcm03400
]
AY601_4691
Enzymes [BR:
pcm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AY601_4691
DNA repair and recombination proteins [BR:
pcm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AY601_4691
Prokaryotic type
AY601_4691
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AMQ01521
UniProt:
A0A127VJZ6
LinkDB
All DBs
Position
complement(5473456..5474760)
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AA seq
434 aa
AA seq
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MKTEVNICWLRRDLRLKDNAALYHALKGSTPVLLLFIFDRHILDDLNDPKDARVTFIYRK
LKELETELQQAGSSILIKYGTPEQIWSELLKTYTVKSVYTNHDYEPYAMERDDALAEYLR
SESIPFQSFKDQVIFEKKEIVKADGKPYTVFTPYFRQWKLKLNDFYLKAYPVKKYLENLL
QIQPFAFPELGTLGFQESDLQFPSASFEHKLAAYEQRRDFPADDATTHLGIHLRFGTVSI
REAAAKALNAGAEKWLSELAWRDFYMMILSQFPHITTQSFKPAYDQIKWLNKEKDFEAWK
NGKTGYPIVDAGMNQLNQTGYMHNRVRMIVGSFLTKHLLIDWRWGEAYFAEKLLDYELAS
NVGGWQWACGCGNDAAPYFRVFNPELQAKKFDPDNKYIYRWAPEYKQEKHSQPIVDHAFA
RERILKVFKEALNN
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagaggtaaacatttgctggttaagaagagatttgaggttaaaagacaatgcg
gcactctaccacgcattaaaaggaagcaccccggttttattgctttttatatttgaccgc
catatactcgatgatttaaatgacccgaaggatgccagagttacctttatctaccgcaaa
ttaaaagaacttgaaactgaattgcagcaagctggctcttccatacttatcaagtatggt
acacctgagcaaatatggtcagaactattaaaaacctacaccgtaaaatcagtctataca
aatcatgattacgaaccttatgcgatggaacgtgatgatgctttagcagaatacctgcgt
tcagaatctataccttttcaatccttcaaagaccaggttatttttgaaaaaaaggaaatc
gtaaaagctgacggaaagccttatactgttttcaccccttactttcgtcaatggaaatta
aagttgaacgatttttatcttaaagcttatccggtaaaaaaatacctggaaaatctgctt
caaattcaaccatttgcttttcctgaattaggtacattaggctttcaggaatcagattta
caatttccctctgcaagttttgagcataaattagctgcttatgaacagcggagagatttc
cccgcagacgatgccacgactcatctgggtatccatttaagatttggaacagtcagtatc
agagaggctgcagcgaaagcattaaatgccggtgctgagaaatggctatctgaactggcc
tggagagatttttatatgatgattttatctcagttccctcatatcaccacacagtccttt
aaaccggcctatgatcagattaaatggctgaataaggaaaaggattttgaagcctggaaa
aatggcaaaaccggatacccaatagtagatgcaggaatgaaccagctgaatcaaacgggc
tatatgcataaccgggtcagaatgattgtaggaagctttttgactaagcatctgttaatt
gactggcgttggggagaagcttattttgcagaaaagttactggattatgaactggctagt
aatgttggtggatggcaatgggcttgcggttgcggcaacgatgcagctccttatttcagg
gtattcaaccctgaattacaagcgaagaaatttgatcccgacaataagtatatctacaga
tgggcaccagaatataaacaagaaaagcatagccaacctatagttgaccatgcttttgcc
agagaacgaattctcaaagtatttaaagaggcgctaaataattag
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