Pedobacter cryoconitis: AY601_5009
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Entry
AY601_5009 CDS
T04341
Name
(GenBank) 3-isopropylmalate dehydratase large subunit
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm00290
Valine, leucine and isoleucine biosynthesis
pcm00660
C5-Branched dibasic acid metabolism
pcm01100
Metabolic pathways
pcm01110
Biosynthesis of secondary metabolites
pcm01210
2-Oxocarboxylic acid metabolism
pcm01230
Biosynthesis of amino acids
Module
pcm_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
AY601_5009
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
AY601_5009
Enzymes [BR:
pcm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
AY601_5009
4.2.1.35 (R)-2-methylmalate dehydratase
AY601_5009
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Gene cluster
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Motif
Pfam:
Aconitase
AcnX
Invasin_D4
Motif
Other DBs
NCBI-ProteinID:
AMQ01825
UniProt:
A0A127VKJ0
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All DBs
Position
complement(5866389..5867795)
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AA seq
468 aa
AA seq
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MSKTLVEKIWDAHVVKSETGFPDILYIDTHLIHEVTSPQAFDGLRKRGLPVFRPQQTVAT
ADHNVPTIDQLLPIKEELSRYQVDMLTKNCAEFGIELYGLGHPFQGIVHVIGPELGITLP
GKTMVCGDSHTSTHGAFGAIAFGIGTSQVEQVFATQCLLQQKPKTMKIEVNGTLGKGVSA
KDIILYIISKISAAGGTGYFIEYAGSAIEALSMEARMTICNMSIEMGARGGLIAPDQITF
DYIKGREFAPASAEWDKSLAYWKTLYSDADAKFDSVLTFKAEDIAPMITYGTNPGMGMGI
RENIPSTSSQPDKEQLSYQKALDYMGFDDDSSLIGKPVDYVFIGSCTNSRIEDLREVAEF
VKGKQKAENVTVWIVPGSKQVEQQAKNEGLDQIFEQAGFQLREPGCSACLGMNEDKIPAG
KYCVSTSNRNFEGRQGPDARTLLVSPLTAAAAAVTGKITDIREMLTKA
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaacattagtagaaaaaatatgggatgcacacgttgtaaaaagcgaaacagga
tttcctgatattctatatattgatacgcacttaatccatgaagtaacctcgccgcaagct
tttgatggcttgcgtaaaagaggcttacccgttttccgtccgcagcaaactgtggctact
gccgaccataatgtacccactatcgatcagttgctgccgatcaaagaagaactatctcgt
tatcaggttgatatgctgaccaaaaactgtgcagaattcggtatcgaattgtatggcctg
ggacatccatttcagggaatcgttcacgtaattggccctgaactgggaattacgcttcca
ggaaaaacaatggtttgtggggatagccatacttctacacacggcgcttttggtgcaatt
gcattcggtataggtacctcacaagtagaacaggtttttgcgacacaatgtttattgcag
caaaagccgaagaccatgaaaattgaggttaacggtactttaggaaaaggcgtgtctgct
aaagacattattttatacattatctctaaaatatcagccgcgggtggtactggttatttt
atagaatatgcaggttcggcaattgaggctttaagtatggaagcccggatgacgatctgc
aatatgagtatagaaatgggtgccagaggtggattaattgcacccgatcaaattactttt
gattatatcaaaggcagagaatttgccccggcaagtgcagaatgggataaatcacttgcc
tactggaaaactttgtacagtgatgcagatgctaaattcgatagcgtattaacgttcaaa
gctgaagacattgccccaatgattacttacggaacaaatccgggtatgggtatgggcatt
cgggaaaacattccatctacaagctctcaaccagataaagaacaattatcttatcaaaag
gcattggattatatgggatttgatgatgattcttctttaatcggaaaacctgttgactat
gtatttattggaagctgtaccaattcccgcatcgaagatttgcgtgaagttgcagaattt
gtaaaaggaaaacaaaaagcagaaaatgtaacggtatggattgttccaggctcaaaacaa
gtcgaacaacaagccaaaaatgaaggtcttgaccagatatttgaacaagcaggctttcaa
cttcgcgaaccaggctgtagtgcctgtttagggatgaatgaagataaaatacctgctgga
aaatactgtgtttctacttcaaacagaaactttgaaggccgtcagggccctgatgcaaga
actttactggtaagtccattaaccgcagcagcagcagcagttacaggaaaaattacagat
ataagagaaatgttgaccaaggcttag
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