Cutibacterium acnes 6609: TIB1ST10_07460
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Entry
TIB1ST10_07460 CDS
T02065
Name
(GenBank) formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pcn
Cutibacterium acnes 6609
Pathway
pcn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TIB1ST10_07460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcn03400
]
TIB1ST10_07460
Enzymes [BR:
pcn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
TIB1ST10_07460
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TIB1ST10_07460
DNA repair and recombination proteins [BR:
pcn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TIB1ST10_07460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AEH29779
LinkDB
All DBs
Position
complement(1567089..1567859)
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AA seq
256 aa
AA seq
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MPELPEVETVRAGLEHFVVPAVVDSVDVVDTRGLRPSGGLEDAALFETTLSGRQFTAVNR
RGKYLWFILDDGTAMLAHLGMSGQFRVSPQHAPQHRHTRIVITLDDGRDLRFLDQRTFGG
LTLAPLVDGIPGPVTHIAPDPFEECFDVDEVARRLCARRSAIKRSLLDQTLVSGIGNIYA
DETLWRVRRHPETPCSRLSQSEAVELLQTARDVMAEAMSQGGTSFDSLYVNVNGESGWFF
RVVDAYGREDEPLPPM
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagctccccgaggtcgagaccgttcgagccggactcgaacatttcgttgttccg
gctgtcgtcgacagcgtcgacgtcgtcgatactcgcgggcttcgccccagcggtggactc
gaggacgctgcgcttttcgagacgaccttgtcgggtcgtcaatttactgccgtgaatcgc
cggggtaagtacctgtggttcatccttgacgatggcaccgcgatgttggctcatctaggt
atgagcggacaattccgtgttagcccccaacatgccccgcagcatcgccatacccgtata
gtcatcaccctcgacgatggtcgtgacctgcgcttcctcgaccagcgcaccttcggcgga
ttgaccctagccccgctcgttgacggtattcccggtccggtgacccacatcgcccctgat
ccgttcgaggagtgtttcgacgttgacgaggtagcgcgacggttgtgcgcacgcaggtcc
gccattaagaggagtttgctcgatcagacccttgtttccgggattggcaatatctatgcc
gacgaaactctttggcgggtccgtcgtcaccccgagacaccatgctctcgcctgagtcaa
tctgaagcggtggaattgttacagacggcccgcgatgttatggcagaggccatgtctcag
ggcggtacctctttcgactccctttatgtcaacgttaacggggaatcggggtggtttttc
cgcgttgtggatgcctatggccgtgaggatgagcccctgccaccgatgtga
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