Phanerochaete carnosa: PHACADRAFT_100019
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Entry
PHACADRAFT_100019 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
pco
Phanerochaete carnosa
Pathway
pco03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PHACADRAFT_100019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pco03021
]
PHACADRAFT_100019
Enzymes [BR:
pco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PHACADRAFT_100019
Transcription machinery [BR:
pco03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
PHACADRAFT_100019
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
18907141
NCBI-ProteinID:
XP_007398964
JGI:
Phaca1_100019
UniProt:
K5VMD1
LinkDB
All DBs
Position
Unknown
AA seq
1141 aa
AA seq
DB search
MDPEDEAGWELHVPKWRGLGLTDPIKAVEDKWLLLPAFLKVKGLVKQHIDSFNYFVDVDI
KSILRANSKVTSDVDPRFWLKYTDIHVGFPDRTDPDAVDKSVTPHECRLRDTTYSAPILA
TIQYTRGKNVVRRPNVNIGRLPIMLRSNKCVLSGRTEIQLARMSECPLDPGGYFVVKGTE
KVILVQEQLSKNRIIVEVDPVKGVVQASCTSSTHGGLKSKTYVATKKGKIYLRHNSIHED
VPIVIALKALGFQSDKEILLLTAGNNEAYKSAFSPNLEEAAKSGVFTKHQALEYIGSRVK
VNRKVIGPRRPAWEEALEVLATIVLAHVPVVNMDFRGKAIFVATMTRRVLMAMDDEKMVD
DRDYVGNKRLELAGQLLALLFEDLFKTFNTNLKSAIDKVLKKPSRTSEFDAFNTMQFMGD
HITAGFVRAISTGNWSLKRFKMERAGVTHVLSRLSFISALGMMTRISSQFEKTRKVSGPR
ALQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDVDEEPIVRLAYMLGVEDISTATGT
EIYGPHTYVVNVNGSIIGLTRYPGRFVHNFRKLRRAGRLSEFVSVYINHHHRTVLIASDG
GRICRPMIIADRGRPRVTTEHILLLKEGKMTFDDFLKQGLVEYLDVNEENDSYIALYESD
IVPTTTHLEIEPFTILGAVAGLIPYPHHNQSPRNTYQCAMGKQAIGAIGYNQQSRIDTLL
YLSVYPQQPMVKTKTIELIGYDRLPAGQNATVAVMSYSGYDIEDALIQNKASLDRGYGRV
QVLRKNATLIRKYPNGTYDRLADAPVDEGSQIQKKYDIIQADGLAGVGERVDPGDVYINK
QTPTNANDNTFTGQAATVPYKNSPMTYKSPVAGYIDKVMVTDTENDQTLIKVLIRQTRRP
ELGDKFSSRHGQKGVCGLIVNQEDMPFNDQGIVPDTIMNPHGFPSRMTVGKMIELLAGKA
GVLAGKLQYGTAFGGSKVEDMSRILVENGFSYAGKDMLTSGITGEPMEAYVYFGPIYYQV
SLSHMVVDKMHARARGPRATLTRQPTEGRSREGGLRLGEMERDCLIGYGATQLLLERLMI
SSDKFEVNACEECGLMGYNGWCTYCKSSKKMAQLTIPYAAKLLFQELMAMNVVPRLVLDD
A
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atggaccctgaggacgaggcgggctgggagttacatgttccaaaatggagagggctgggc
ctaacggatcctatcaaggcggtcgaggataaatggctgctgctgcctgccttcctcaaa
gtcaaaggattggtgaagcagcacattgactcgttcaactatttcgtcgacgtggatatc
aaaagcatacttcgcgcaaacagcaaggtgacctccgacgtcgatcctcgcttctggctg
aagtacaccgacatccacgtaggcttccccgaccgtaccgaccccgacgctgttgacaaa
agtgttacccctcacgagtgtcgtttgcgggacaccacatactccgctcctatcctcgct
actatccagtacacccgtggcaagaacgttgtgcgcaggcctaacgtgaacattggtcgt
ctacccattatgctccggagtaacaagtgtgtgctcagcgggcggacggagatccagctt
gcgcgcatgagtgaatgccctctcgaccctggagggtacttcgtggtgaagggcacggag
aaggtcatcctggtccaggagcagttgagcaagaatcgtatcattgtcgaagtcgaccct
gtcaagggcgtcgtgcaagcgtcctgcacatcttcgacacacggaggtctcaagtccaag
acgtacgttgcgactaagaagggcaagatctacctccgccataactcgatacatgaggat
gtgcccattgtgatcgctttgaaggctctcggcttccaatccgacaaggaaatattgctc
cttactgcggggaacaacgaagcctacaagagtgcctttagtcctaacctggaggaggcc
gccaagtcaggcgtgttcacgaagcaccaggctcttgaatacatcggtagccgcgtcaag
gtgaaccgcaaagtcatcggaccgcgacggccagcttgggaagaggctcttgaggtcctt
gctactatcgttcttgcgcacgtacctgtcgttaacatggacttccgcggaaaggctatc
ttcgtagctacgatgacgcggagggtactcatggcaatggatgacgagaagatggtggac
gatcgagactatgtgggcaacaagcggctcgagcttgccggacagctgctggctctactt
tttgaggacctattcaagacttttaacactaatcttaagtcggctatcgacaaggtcttg
aagaaaccgtcgcggacatcggagttcgacgcgttcaacacgatgcagttcatgggcgac
cacatcacggctggctttgtgcgtgcgatcagcacaggcaattggtcgctgaaacgcttc
aagatggagcgagcgggtgttacgcacgtcctcagtcggctctcgttcatcagcgcactt
ggtatgatgacgcgcatcagctcccagttcgaaaagacgaggaaggtgagtgggccacga
gcgctgcagccgagtcaatggggaatgctctgccccagtgatacacctgaaggcgaggca
tgcggtctcgttaaaaacctcgccttgatgacacatatcaccacggacgttgacgaggag
ccaatcgtccgattggcgtatatgctcggcgtagaggacatcagcactgcgactggcacc
gaaatttacggtccacacacgtatgtcgtcaacgtcaacggttccattatcggcctcact
cgctaccctggccgttttgtgcacaatttccgaaagcttcgtcgtgctggtcgcctaagc
gaattcgtgagcgtgtacatcaaccaccaccatcgtacggtcctcattgcgagcgacgga
ggccgcatctgtcgaccgatgatcatcgccgacagaggccgtcctcgcgttacgacggag
catattctcttgctaaaggagggcaagatgacgtttgacgacttcttgaagcaaggtctc
gttgagtacctcgacgtcaatgaggagaatgattcgtacattgctttgtacgagagcgac
attgtccccacaacgactcatctggagatagagccgttcactattcttggcgccgttgcc
ggtcttattccgtatccacaccataaccagtcgcctcggaacacctaccaatgtgccatg
ggtaaacaggcgatcggcgcgatagggtacaaccagcagagccgtatcgatacgttgctc
tatctgtcagtttacccgcaacagccgatggtgaaaactaagaccatcgaacttatcggg
tacgatcgcttgcccgctggccagaatgccacagtagccgtgatgagctactcgggatat
gatatcgaagatgcgctcatccagaacaaggctagtctggaccgaggatacggacgtgta
caggttttgcgcaagaacgcgacgctgatccgcaagtaccccaacggaacatatgatcgc
ttggcggatgctccggtggatgagggcagtcaaatccagaagaaatacgacatcatccag
gcagatggactcgcaggcgtcggcgagcgtgttgatcctggtgatgtgtacattaacaag
caaacaccgacgaatgcaaacgacaacaccttcacaggccaggcggcaacagtaccctac
aagaactcacccatgacgtacaaatcccccgtcgcaggctatattgacaaagtcatggtc
acagacacagagaatgaccagacgctgatcaaggtccttatccgtcagacgcggcgcccc
gagctcggggacaaattctcgtcgcgtcacggacagaaaggtgtttgcgggctgattgtc
aatcaagaagacatgccatttaacgaccagggcatcgtgcccgatactattatgaacccg
catggttttccttctcggatgacggtgggcaagatgattgagctactcgcaggcaaggcc
ggcgttctcgcgggcaagctccagtatggcacagcgtttggaggctccaaggtcgaagac
atgtcccgaatcctggtcgagaatggtttcagttatgcagggaaggacatgctcaccagc
ggcatcactggtgagcccatggaggcctacgtatattttggccctatctattatcaagtg
agtctctcacacatggtcgtggacaagatgcatgcccgcgcaagaggtccacgtgctacg
ctgacccgacaacctaccgagggacggtctcgcgagggcggtctgcgtctcggagagatg
gagcgcgactgtctgatcggctacggcgcaacgcagctccttctcgaacgcttgatgatt
tcgtcggacaagttcgaggtcaatgcgtgcgaagagtgcgggctcatgggttacaacgga
tggtgcacgtactgcaagagctcaaagaaaatggcccagctcaccatcccatatgccgca
aagcttttgttccaggagcttatggctatgaatgtcgttccgcggctggtgcttgacgac
gcatga
DBGET
integrated database retrieval system