Phanerochaete carnosa: PHACADRAFT_100277
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Entry
PHACADRAFT_100277 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K12190
ESCRT-II complex subunit VPS36
Organism
pco
Phanerochaete carnosa
Pathway
pco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
PHACADRAFT_100277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pco04131
]
PHACADRAFT_100277
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pco04147
]
PHACADRAFT_100277
Membrane trafficking [BR:
pco04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
PHACADRAFT_100277
Exosome [BR:
pco04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
PHACADRAFT_100277
Exosomal proteins of colorectal cancer cells
PHACADRAFT_100277
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Zn_ribbon_RanBP
Vps36-NZF-N
DZR
Motif
Other DBs
NCBI-GeneID:
18907149
NCBI-ProteinID:
XP_007399159
JGI:
Phaca1_100277
UniProt:
K5W179
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MSALKRYTELVDGTIPVPALLYQDEDLLASQGDVGIYDGPQKSPQHQSGSVHISNIRLFY
VDYSHPHSRSFALNLSHICRTDYWAGLLRSSAKVTVYLNPMPSRTMPMNTSKSRQDTSSG
SDVWECEVCSYRNPPGLSPSASMVCGLCGVPRSAVPSAPVDSNTTMQSKSRVPAETSHLS
SSLPSSSHHLPLPARTEQPSQIACPACTFLNYPSLSSCEICGTALPRPVHPTARSAPPSR
PTSDDEDDDDDEREEGPRMIKVSFRKGGDKAFYAVLRRSLLDKAWEVRYPRRHPKHTESL
RNQCVATSAARTWNVHDRVSTDGILQEVQTAAAATQTNMEDALQDLETLKIQAREMVRYA
EELNERLTAVSALPSSFSSSPAPAGAAPGSAAVEPEEATFIRSSLAQLGLQMSNAPVTLD
MIQDERKWHEELARELAGVLQGTPGRGKAAAAGMMRRRGIVALDEVWGGWNRARGVALIP
PATFLLALPYLPQCTDPPIHTRTFSSSLSVLHTPPFTRAAFSARLVGLLTLVGPRTTVDV
AYEESLPIGLVQEMVLEVEGVGEICRDEGEGRLDAFGRGQEVRWWMNIFHDLVWDGQVDE
LLAP
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcactaaagcgttacactgagttggtcgacgggacaattccagttcctgccttg
ttgtatcaagacgaagaccttctcgcctctcagggagacgtaggcatttatgacggcccc
cagaaatcgcctcagcatcaatccggatccgttcatatatcaaacattcgactgttttac
gtcgactacagtcacccgcactctcgctcctttgccttgaacctttctcacatctgccgc
acggattactgggcggggcttctccgcagctctgccaaagtgacggtgtacctcaacccc
atgccgtcgcggaccatgccgatgaatacatcaaagagtcggcaagacacgagcagtggc
tctgatgtctgggaatgcgaagtttgcagctaccgcaatccgccgggcctgagcccttct
gcatccatggtctgcggattgtgtggtgtaccacgttcggcagtcccctctgcgcctgta
gattccaacacgacaatgcagtcgaagtccagagtgcctgccgagacgagccatctctct
tcgtctctgccctcctcgtcacatcacctgcccctgcctgcacggacagaacagccttcc
caaatcgcctgtccagcctgcacgttcttgaactacccctcactctcttcatgcgagatt
tgcggaacagctctgccgcgtccggtgcacccgactgccaggagcgctccaccgtcaagg
ccgacgtcggacgacgaagatgacgacgacgacgaaagagaggaaggcccaaggatgatc
aaggtcagcttcaggaaagggggcgacaaggcattctacgcggtattgcgtagaagtctc
ctagacaaagcctgggaggtaaggtacccgcgccgccaccccaaacacactgaatcgctc
cggaatcagtgcgtggccacgtctgctgcacgcacctggaatgttcatgaccgtgtttcc
acagatggcatcctccaggaagtgcagaccgctgccgctgcgacgcaaacgaacatggag
gacgcgctgcaggatctcgagaccctcaagatccaggcgcgcgagatggtgcgctacgcc
gaggagctcaacgagcggctcactgcggtgtctgctctgccgtcctcgttctcgtcgtca
ccagcccccgcgggggccgctccgggatcggccgccgtggagcccgaagaggcgaccttc
atccgctcgtccctggcgcagctcgggctgcagatgtccaacgcgccggtcacgctggac
atgatccaggacgagcgcaaatggcacgaggagctcgcgcgggagctcgcgggcgtgcta
cagggcacgccgggcaggggaaaggccgccgcggcaggcatgatgcgtcgccgggggatc
gttgccctcgacgaagtctggggcgggtggaaccgcgcgcggggcgtcgcgctgatcccg
cccgcgacgttcctgctcgcgctgccgtacctgcctcagtgcacagacccgccgatccac
acgcgcacgttctcgagcagcctgtccgtgctgcacacgccgccgttcacgcgcgcggcg
ttctcggcgaggctcgtcggcctcctgacgctcgtgggtccgaggacgactgtggacgtc
gcgtacgaagagtcgctcccgatcggcctcgtccaggagatggtgctcgaggtcgagggc
gtcggcgagatctgccgagacgagggggaaggcaggctcgacgcatttgggcgtgggcag
gaggtgcgctggtggatgaatatcttccatgacctcgtttgggacggtcaagtggacgag
ctccttgcgccctga
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integrated database retrieval system