Phanerochaete carnosa: PHACADRAFT_109114
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Entry
PHACADRAFT_109114 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pco
Phanerochaete carnosa
Pathway
pco03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PHACADRAFT_109114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pco03019
]
PHACADRAFT_109114
03009 Ribosome biogenesis [BR:
pco03009
]
PHACADRAFT_109114
Messenger RNA biogenesis [BR:
pco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PHACADRAFT_109114
Ribosome biogenesis [BR:
pco03009
]
Eukaryotic type
Pre-60S particles
RNases
PHACADRAFT_109114
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
18907567
NCBI-ProteinID:
XP_007403123
JGI:
Phaca1_109114
UniProt:
K5VNR0
LinkDB
All DBs
Position
Unknown
AA seq
126 aa
AA seq
DB search
ENPIVWIDLETTGNEVFRDTILEIAVIITDQHLREAHPGIQYVIKTDDQTLNSMHPECIK
MHADSGLTAECKQSPHTKEFVRDQVLAYIQEYVPKFKGVIGGSSVHFDKTILMREMPLIT
DWLKYQ
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
gagaatcctatcgtttggatagacttggagaccactggaaacgaggtattccgtgacact
atactggagatcgctgtgattatcacagatcagcatcttcgcgaggcgcaccctggtatc
cagtatgttatcaagacggacgaccagactctcaacagcatgcacccagagtgcatcaag
atgcatgcagactccgggctgactgcagagtgcaagcagtctccgcacacaaaggagttt
gtccgtgatcaagtactggcatacatacaggaatacgttccgaagttcaaaggtgtcatc
ggaggaagctctgtccactttgataagaccattctcatgcgcgagatgccgcttattacc
gactggctcaagtaccagtaa
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