Phanerochaete carnosa: PHACADRAFT_110354
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Entry
PHACADRAFT_110354 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
pco
Phanerochaete carnosa
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pco03009
]
PHACADRAFT_110354
Enzymes [BR:
pco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PHACADRAFT_110354
Ribosome biogenesis [BR:
pco03009
]
Eukaryotic type
90S particles
Helicases
PHACADRAFT_110354
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
18907619
NCBI-ProteinID:
XP_007390160
JGI:
Phaca1_110354
UniProt:
K5W9S8
LinkDB
All DBs
Position
Unknown
AA seq
576 aa
AA seq
DB search
MEAFHLLSRGGALFDKKRFKKDVQLFDKSKNQDKGKGIAKPATDGELPRELDFFKYAQGG
STKRKTESDPQTTIKKARLEEDMEADEGTEDIKAAEDGEPSSSMSRQRVTAKGNSVPAAV
ESFEELMERYNIPGKLLQNLEASGYGQPTGIQAHGVPILLEHRDLAAISPTGTGKTLSYL
LPVFASLGAPSSSSDSEHGQGVRALVLAPTRELAHQIHNECLKLAQGRKWRIVLFSKATA
ATLADKNAQDKVDIVISTPLRMVAALQSGNLKLSNVRHLVLDEADRMLDPEFLEQIREII
AACSYPRVQKAVFSATLPANAERIAMDMMTNPIRVVVGLKDTPLPLIAQSLTYVHDDSSK
LPTLLQYLAQPYNPPVLVFVSTQPRASSLAEELVLNDIQNVDCLHAGMSKKEREDAVSRM
RKGESWVMVTTEVMARGMDFKGVREVINYDFPQSVQSYVHRIGRTGRAGREGKAVTYFTD
EDAPFLKTIANVILQSGSTVPEWILKLPKPSKMKRREMGKVKRADAVNSARRIGRQEAIK
KRCMVKASKRRKERVIQIAHPQRGDGKPSEAAENAE
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgtttcatctactctcgcgtggaggtgccctattcgacaagaagcgattcaag
aaggatgtgcaactgttcgacaaatccaaaaatcaggacaagggcaagggcatagcaaag
cccgccacggacggcgagctccccagggagctagacttcttcaaatacgctcagggcgga
tcgacgaagcgaaagacagagtcagacccgcagacaacgatcaagaaagcacgcttggaa
gaggacatggaagctgacgagggcaccgaggatatcaaggcggcagaggacggcgaaccg
tcgagctctatgtcgcgacaacgggtgactgcgaaggggaacagcgtgcctgcagcggtg
gaaagctttgaggaactgatggagagatataacatcccgggaaagctgctgcagaatttg
gaggcaagcggatacggacagcccacgggtattcaggcgcatggcgtgcctatcctcctg
gagcaccgagaccttgctgcaatatcgcccacagggacgggcaaaacgctttcgtacctc
cttcccgtctttgcatcccttggtgcacccagctctagctcagactccgagcatggacag
ggcgtccgcgctctggttcttgcgccaactcgtgaattggcccaccaaatacataacgaa
tgccttaaattagctcaaggacgcaagtggcggattgtcctgttcagcaaggcgacagcg
gctacacttgcggacaagaacgcacaagataaagtggatattgtaatcagtacgccatta
cggatggtcgccgccctgcagtcaggcaaccttaagctgagcaacgtgcgtcatctagtt
ctggatgaagctgatcgtatgctggatcctgaattcttggaacaaatacgagagatcata
gccgcatgtagctatccccgagtacagaaggctgtattcagcgcgacgcttcctgcgaac
gcggaaaggatagctatggacatgatgaccaatcctatacgagtcgttgtcggtctaaaa
gacacaccgctgccgttaattgcccaatcgctgacttacgtacatgacgactcctcgaag
ctgcctacattgctgcagtaccttgcacaaccctacaacccacctgttctggtgttcgta
tcgacgcaaccgcgcgcatcatcactcgccgaagagcttgtgctaaacgacattcaaaat
gtcgactgtctccatgcgggcatgagcaagaaggagcgagaggatgctgtgtcgcgcatg
cgcaagggtgaaagctgggtgatggtgactacagaggttatggcacgtggtatggacttc
aaaggcgtgcgcgaggtcatcaactacgacttcccccaaagtgtgcagagctatgtccac
cgcatcggtcgtacgggacgtgccggcagagagggcaaggccgttacttacttcacagat
gaagacgctcccttcttgaagaccatcgcgaacgttatcctccaatctgggtcgactgtg
ccggaatggatcctcaagctgcccaagccgtccaaaatgaagcggcgcgagatgggcaag
gtaaagcgcgcagatgcggtcaactctgctcgccgaatcggcaggcaagaggcaatcaag
aagaggtgcatggtcaaagcgtcgaagaggcggaaggagcgcgtgatacagatagcccat
ccacaacgcggcgacgggaagccttcggaagccgctgagaatgcagagtag
DBGET
integrated database retrieval system
