Phanerochaete carnosa: PHACADRAFT_111883
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Entry
PHACADRAFT_111883 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
pco
Phanerochaete carnosa
Pathway
pco03030
DNA replication
pco03410
Base excision repair
pco03420
Nucleotide excision repair
pco03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PHACADRAFT_111883
03410 Base excision repair
PHACADRAFT_111883
03420 Nucleotide excision repair
PHACADRAFT_111883
03430 Mismatch repair
PHACADRAFT_111883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pco03032
]
PHACADRAFT_111883
03036 Chromosome and associated proteins [BR:
pco03036
]
PHACADRAFT_111883
03400 DNA repair and recombination proteins [BR:
pco03400
]
PHACADRAFT_111883
DNA replication proteins [BR:
pco03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PHACADRAFT_111883
DNA Replication Termination Factors
ELG1-RFC complex
PHACADRAFT_111883
Chromosome and associated proteins [BR:
pco03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
PHACADRAFT_111883
DNA repair and recombination proteins [BR:
pco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PHACADRAFT_111883
Check point factors
HRAD17(Rad24)-RFC complex
PHACADRAFT_111883
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
RuvB_N
AAA_16
AAA_3
RCF1-5-like_lid
nSTAND3
Viral_helicase1
Mg_chelatase
Rad17
Gp44_lid
MeaB
GcpE
AAA_assoc_2
SRP54
AAA_5
DNAX_ATPase_lid
AAA_24
AAA_19
NTPase_1
RNA_helicase
ABC_tran
Motif
Other DBs
NCBI-GeneID:
18907647
NCBI-ProteinID:
XP_007390786
JGI:
Phaca1_111883
UniProt:
K5WPJ7
LinkDB
All DBs
Position
Unknown
AA seq
342 aa
AA seq
DB search
MSTDKGKAPANGTAASLPYELPWVEKYRPKTLDDVVGNSETIERLKVVARDGNCPHIILS
GLPGIGKTTSIHCLAHQLLGDAYKEGVLELNASDERGIDVVRNKVKAFAQKKVTLPPGRH
KIVILDEADSMTPGAQQALRRTMEIFANTTRFALACNMSNKIIEPIQSRCAILRYAKLRD
AEVLRRLLEICEMEGVKYNDDGLTALIFTAEGDMRQAINNLQSTFSGFGFVSADNVFKVC
DQPHPVVVQAMIRSCLKGDVENAMEKLNELWNHGYSAVDIVVTIFRVVKTFDEIPEYTKL
EYIKEIGFTHMRILEGVSTLIQLGGLMARLCKMNLKPELFKI
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtccacagacaagggaaaggctcctgctaacggaacagcagcgagccttccgtacgag
ctcccatgggtcgagaagtacagaccaaaaacgctggacgacgttgtcggcaactcagag
acaattgaacgcctgaaggtcgtcgcgagggatgggaattgcccgcatattattctctca
ggcctacctggcattggcaaaaccacgagcatacattgcttggctcaccagctcctggga
gatgcctacaaggagggagtcctcgagttaaatgcttcagatgaacgaggtattgacgtg
gtccgcaacaaggtcaaggcgttcgcacagaagaaagtaacgcttccaccaggccgtcac
aagatagtcatcctcgacgaagcggatagcatgactccaggtgctcaacaggcactaaga
agaacaatggagatctttgcgaatacgacgcggttcgctctggcatgcaacatgtcgaac
aagatcatcgaacctatacagagtcgctgtgccatattgaggtatgcgaaactgagagac
gcagaggttctgaggcggctgcttgagatatgcgagatggaaggtgtgaagtacaacgat
gacggcttaacagccctcatcttcactgcagaaggtgacatgcgacaagctatcaacaat
ctgcaatccacattctctggctttggtttcgtgtcagccgacaacgttttcaaggtctgc
gaccagccacaccctgtggtggtacaagccatgattcggtcgtgtttgaagggagacgtt
gaaaatgcgatggagaagcttaacgaactctggaatcatggctatagtgccgtggacatt
gtggtcacgattttccgcgtcgtgaagacgttcgacgagataccagaatacacgaaactt
gaatatatcaaggagatcggcttcacgcatatgcgcatcctggagggcgtcagcactctc
attcagctcggagggctcatggcgaggctctgtaagatgaacttgaagccggagctgttc
aagatatga
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integrated database retrieval system
