Phanerochaete carnosa: PHACADRAFT_112286
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Entry
PHACADRAFT_112286 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
pco
Phanerochaete carnosa
Pathway
pco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PHACADRAFT_112286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pco03041
]
PHACADRAFT_112286
Enzymes [BR:
pco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PHACADRAFT_112286
Spliceosome [BR:
pco03041
]
Complex C
Other components
Step II factors
PHACADRAFT_112286
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
S1
DEAD
AAA_22
nSTAND3
AAA_30
AAA_19
SLFN-g3_helicase
T2SSE
Ploopntkinase3
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
18907657
NCBI-ProteinID:
XP_007390974
JGI:
Phaca1_112286
UniProt:
K5VEW1
LinkDB
All DBs
Position
Unknown
AA seq
1165 aa
AA seq
DB search
MSEEDIYNLEFLSLVAKITQELLNHTGLNDKTLAEFVIALHDESKTIAEFKQKLKDVGAN
FPESFIENMDRLILNMHPKHKKKSATTAAANGSGGETTLDETEKKKRMFPGLALKDQEWQ
PSVDKDVLMKEVDDMMSQFEGVAKKARPRPAENGTDRSPKRQRRSRSRSPRRRSPSPPRG
RGFDRRDDDRGRGRGRGPLDDRPVLFKVYNGRVSGLKDFGAFVQVEGVAGRVEGMVHVSN
IQQGARANSAPDLLSRGQQVKVKVMSLAGNRIGLSMKDVDQATGRDLTPHLRIKSEAEIA
EEEARMSARGANAVPLNSKGFRDEPVRSAKRLTSPERWEIKQLISSGIVDASEYPDLDEE
FNNPVARAEVEEELDVEVKEEEPPFLAGQTKRTLELSPVKIVKAPDGSLNRAALAGASLA
KERRELRQQEANEEADSEARDFSAPWLDPMSKDSDKVFAQDMRGNLRGQKANEQPKWKEV
TFNKTTTYGEISKMSIQEQRKNLPIYKLRDPLLQAIRDHQVLIVVGDTGSGKTTQMVQYL
AEDGYADRGRIGCTQPRRVAAMSVAKRVSEEVGCRLGQEVGYTIRFEDCTSPETRIKYMT
DGMLQRESLIDPDCTQYSVVMLDEAHERTIATDVLFGLLKKAIKRRSDLKLIVTSATLDA
EKFSKYFFGCPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLSEPPGDVLLFLTG
QEEIDTACEILYERMKALGPKVPELMVLPIYSALPSEVQSRVFEPTPPGARKVVVATNVA
ETSLTIPGIYYVIDPGFSKQNAYDPRLGMDSLVVMPISQAQARQRAGRAGRTGPGKCYRL
YTEAAFRNEMLPNSIPDIQRTNLASTILTLKAMGVNDLLSFDFMDPPPAQTMLTALESLY
ALSALDDEGLLTRLGRKMADFPMDPPLAKMLIASVDYGCSEEILSVVAMLSVQSVFYRPK
EKQAQADSKKAKFHQPEGDHLTLLTVYNGWKASNFSNPWCYENFIQARSMRRAQDVRKQL
LGIMDRYKHDILSAGKDYNRVRRAIASGFFRHAAKKDPQEGYKTLVEGTPVYIHPSSALF
NRNPEWIIYHELILTTREYCHNVTAIEPKWLVEVAPQFFKVADANKISKRKKQEKIEPLY
NKYEKADEWRLSKVKRSARSSQTFG
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagaggacatatacaatcttgagtttctttccctcgttgccaaaattactcaa
gaactcctcaaccacaccgggcttaatgacaaaactctagccgagttcgttattgctctc
catgatgagtccaagaccatcgccgaatttaagcagaagctgaaggatgtcggggcaaac
tttcccgaatctttcattgagaatatggaccggttaattctcaacatgcatccgaaacac
aagaagaaatctgcaacgactgcagcggcgaatggatccggcggggagacgacactggac
gagacggagaagaagaagcggatgtttcctggtctggcattgaaagaccaggaatggcag
ccgagcgtagacaaggatgtgctgatgaaggaggtggatgatatgatgtcgcagttcgag
ggtgtggcgaagaaagctcgacctcgcccagctgagaacggcacggatcgttcacccaag
cgccaacggcggtcgcgttcacggtctccacgtcgacgtagcccgagcccgccccgaggt
cgtggctttgaccggagggacgatgacagagggcgcggacgaggtagaggacctctcgat
gaccgaccagtcttgttcaaggtctacaacggtcgcgtctctggcttgaaggactttggc
gctttcgtacaggtggaaggtgtagccggacgagtagaaggcatggtgcatgtgtccaat
atacagcaaggcgcacgagccaactccgcgcccgatcttctaagtcgtgggcaacaggtc
aaggtcaaggtcatgagtttggcaggcaaccgcataggtttgtctatgaaagacgttgat
caagccactggccgggatcttacaccgcatcttcgtatcaagtccgaggcagagatagct
gaagaagaagcacgcatgtctgcccgtggcgccaacgctgttcctctcaactcgaaaggc
ttcagagacgaacctgttcgatcagcgaagcgcctcacctcacccgagcgttgggagatt
aagcagctcatctcgtcagggatcgtggacgcttcagaatatcccgacctagacgaagag
ttcaacaatccagttgctcgcgccgaagtcgaggaggagctggatgtggaggtcaaagaa
gaagaacctccgttcttggcagggcagacgaagcgcacactagagctcagtccggtcaag
attgtcaaggctccagatggttcccttaacagagcagctctcgctggtgcatccttggca
aaggagcggcgggagctgcggcagcaggaggcgaacgaggaggcagactcggaggcgcga
gacttcagcgcaccatggctcgacccgatgtcgaaagattcggacaaggtcttcgcacaa
gacatgcgtggtaatcttcgaggtcagaaggcgaacgagcagccgaagtggaaggaggtc
acgtttaacaagacgacaacgtacggcgagatctcgaagatgagtatccaagagcagcga
aagaatctccccatctacaagctgcgcgatccactgcttcaagctattcgtgatcaccaa
gttctcattgtcgttggtgacaccggttccggcaagaccacacagatggtgcagtacctc
gccgaagatggttacgctgacagaggcaggatcggttgcacacagccgcgtcgcgtcgcc
gccatgtccgttgcaaagcgtgtctctgaggaggtcggttgtcgtcttggtcaggaagtg
ggctataccatccgtttcgaggactgcactagcccggaaactcggatcaagtacatgacg
gacggtatgctccagcgtgagtccttgattgatcccgactgcacccagtattccgtcgtc
atgttggatgaggcgcacgaacgtacgattgccactgacgttctgttcggtctcctcaag
aaggctatcaagcgccgctcagacctcaaactcattgtcacctccgctactctcgacgcc
gagaagttttcaaagtacttctttggctgtcctattttcaccatccctggtcgaacctat
cctgtcgagattctctacaccaaagaaccggagaccgactatctcgacgcttctctcatc
actgtcatgcaaatccacttgtctgaaccacccggtgatgttctgcttttccttacgggt
caagaggagatcgacactgcatgcgagatcttatatgaacgcatgaaagctctaggtcca
aaagtaccggagttgatggtccttccgatttactctgcgctgccttccgaggttcaatct
cgggtctttgagccaacacctcctggtgcacgtaaggtcgtcgttgccaccaacgtcgcc
gagaccagtttgaccataccaggtatctactacgtcatcgatcccggattctcgaaacag
aacgcctacgaccccagacttggtatggactcgctcgtagtcatgcccatctctcaagca
caggcgaggcagcgtgctggccgtgctggccgtaccggtcccggcaagtgctaccggctc
tacaccgaggccgcgttccgtaatgagatgctgccgaactcgatccccgatatccagcgt
acgaacctggcgagtacgatcttgacgctcaaggcaatgggcgtcaacgacctcctcagc
ttcgacttcatggatccaccaccagcgcagacgatgttgactgccctcgagtcgttatat
gcgctctccgcgctagacgacgaaggcctgctgacgcgtcttggtcgtaagatggcagac
ttccccatggacccgcccctcgcaaagatgctgattgcgtcagtcgactacgggtgttct
gaagagatcctgtcggtcgtcgcgatgttatccgtgcagagtgtcttttaccgaccgaaa
gagaagcaggcgcaggcggattcaaagaaggcgaaattccaccagcccgagggcgatcat
ctgacgctgctgactgtatacaacgggtggaaggcgagtaatttctcgaacccgtggtgc
tatgagaacttcatccaagcgcggagcatgagacgtgcgcaggatgtccggaagcagctg
ttgggtattatggaccgttacaagcacgatatcctctctgccggcaaggactacaaccgc
gtccgtcgtgcaatcgcttctggcttcttccggcatgccgcgaagaaggatccacaggag
ggttacaagacgcttgtagaaggcacaccagtatatatccacccatcgtccgcactcttc
aatcgcaatcccgagtggatcatctaccacgaattgatcttgacgacgcgcgagtactgc
cacaacgtgaccgccatcgagcccaagtggctcgtcgaggtcgcgccgcagttcttcaag
gttgcggatgcgaacaagatcagtaaacggaagaagcaggagaagatcgaacctctgtac
aacaagtatgagaaggccgacgaatggcggttgtcgaaggtcaagaggagcgctcgttcg
agtcaaacgttcggttaa
DBGET
integrated database retrieval system
