Phanerochaete carnosa: PHACADRAFT_113612
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Entry
PHACADRAFT_113612 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
pco
Phanerochaete carnosa
Pathway
pco03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PHACADRAFT_113612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pco03009
]
PHACADRAFT_113612
Ribosome biogenesis [BR:
pco03009
]
Eukaryotic type
Pre-60S particles
RNases
PHACADRAFT_113612
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
CHORD
Motif
Other DBs
NCBI-GeneID:
18907690
NCBI-ProteinID:
XP_007391795
JGI:
Phaca1_113612
UniProt:
K5X8M2
LinkDB
All DBs
Position
Unknown
AA seq
539 aa
AA seq
DB search
MFPTLGLFHKLPCPEKAHCQRQNCLFSHSPEVTEISVTPVPVEVQKPVLPQISSQPESIA
SSSKTPFAQARIAHVVPAKRSMGSPLRLAANGTPPTEPPSKLQRVGTLQRSIAVPTLAYT
SEGVPLLRVNAAASQVAVPVRQTMVKSLWEHFKVLYQSIIDRNPTLPAEHALAQEEEVYK
KSTKLTYRNAVISAVAAIKRRPLPDSASHPSVGTEEEVAKRAEERKKLQSLKIMPSNLDP
YILSPEQMRTWDYVVEIPPGPGGERPSEEGAVMKCERCGQPFKVKRMEEADECVFHWGKP
FSSKTNGSSPFSSKRRVYTCCSRTTDEEPCTRGHHVFYERDPGDLHKRHPFSLSRPAKAD
EPDTSLDIVALDCEMIYSTGGMRVARVSVVDSTGKEVFDEFIRMDDGVEVIDFNTRFSGI
TPENYAQATLPLAEIRESLDAYINENTIIIGHALENDLKTLRMIHHKCVDTAVMFPHPSG
PPYRRALRHLVKEHLGKTIQAGGGTVGHSSVEDSIATLDLVRWHILHSSKPTPNLPATQ
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtttccgaccttgggtctttttcacaagctaccatgtccagagaaagctcactgccag
aggcagaactgcctcttcagccatagcccagaggtcacagagatctccgtaacgccggtg
ccagtagaggtccagaagcctgttttgccgcagatatcctcgcaacctgaatccatagca
tcgagctccaagacaccgtttgcgcaggcaaggattgctcatgtcgtgccagccaaaagg
tctatgggctcgccgctgcggctggcagccaatggcacgccccccactgagccgcctagc
aagctacagcgtgttggcacgcttcagagatcaatcgcagtccccactctagcttacacc
tctgaaggcgtgcctttgctcagagtcaatgcggccgcgtcgcaggtagctgtgcccgtt
cgtcagacaatggtgaaatcgctatgggaacacttcaaagtactgtaccagagcattatc
gataggaatccgacgcttccagcggagcatgccctagcccaagaagaggaagtctacaag
aagtccacgaaactgacttaccggaatgctgtgatctctgctgttgcagctataaagaga
cggccgctccccgactctgcgagccatccttccgttggcacagaagaagaagtcgcaaaa
cgtgcagaagagcgcaagaagctgcaatctctcaagatcatgccaagcaatctcgatcca
tacatcctgtctcccgaacaaatgcggacatgggactacgtcgtcgagatcccgccgggc
ccgggtggcgagcgaccaagcgaagagggcgcggtcatgaagtgcgagcgatgtggccag
ccattcaaggtcaagcgcatggaggaagcagatgagtgcgtcttccactggggaaagcca
ttctccagtaaaacaaatggctcgtctccattctcttctaagcgacgcgtctacacttgc
tgctcaaggactacagatgaagagccatgtacgagaggacatcatgttttctacgaacgt
gatcccggggacctgcacaaacgccatcccttctctctctcacgtcctgcgaaggcagac
gagcctgacacttccctagatatcgttgctctggactgcgagatgatctacagcaccggc
gggatgcgcgtcgcccgtgtgtcagtagtcgactcgacaggcaaagaagtgtttgacgag
tttattcggatggatgacggcgtggaggtgattgacttcaatacccgtttttctggcatc
actccggagaactacgcacaagctacactaccattggcggagatccgcgagtctcttgat
gcgtacatcaacgagaacaccatcattataggacacgctcttgagaacgacctgaagaca
ctgcggatgatccatcacaagtgtgtagatactgcagttatgttcccccatccgtctggt
ccgccgtaccgacgcgcactgagacatttggtcaaggagcaccttggcaagactatccag
gccggcggcggcactgtggggcacagctctgtcgaagactccatcgcaaccttggatctc
gtccgttggcacatcctgcacagttccaaacctacaccgaaccttcctgctactcagtag
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