Phanerochaete carnosa: PHACADRAFT_114297
Help
Entry
PHACADRAFT_114297 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K13176
THO complex subunit 7
Organism
pco
Phanerochaete carnosa
Pathway
pco03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PHACADRAFT_114297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pco03019
]
PHACADRAFT_114297
03041 Spliceosome [BR:
pco03041
]
PHACADRAFT_114297
Messenger RNA biogenesis [BR:
pco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
PHACADRAFT_114297
Spliceosome [BR:
pco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
PHACADRAFT_114297
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THOC7
Filament
PAM2
Paramyxo_C
Cortex-I_coil
PIN_8
Biopterin_H
HrpB2
Ufd2P_core
Motif
Other DBs
NCBI-GeneID:
18907710
NCBI-ProteinID:
XP_007392041
JGI:
Phaca1_114297
UniProt:
K5V9H4
LinkDB
All DBs
Position
Unknown
AA seq
357 aa
AA seq
DB search
MAETLETHSQPGTSPQSVVIPPMTMQQEDSIIHTRLTNDEKALRRVTKKFHSYTSVAYDP
VVPPSPSTAGSVDDAREAFLVELASFHLSLKKSLMVCEAEARQVEEYQREKERIEHQRVL
LRDQLEELKQALEHAQVQRRRKMEYDVIAEKIHTIPSREELEQTINSLESDMAAIRAEHE
EQTRVLRAQQSALDDVISHIRDLRLLANPDIDAIEQAQRGSPAPETQPSEDTDVPSEPRT
REETGEIQETPESDKDTQAGGASSSKFLNPSAQPFVPGATTSRIATPQTAAPTPTPSVDP
RAEEQEEGEADDDVEMGELAEEPGERPVTKKKVREELEEGEASDSDLDSELTQLSDD
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaacactggagacgcattcacaacctggaacttcgccacagtcggtcgtcatc
ccccctatgaccatgcagcaggaagacagtatcattcatacgcgcttaaccaacgacgag
aaggcactgcggagggtcaccaagaagtttcacagctatacgtcggtggcatacgaccct
gtggtcccgccgtcaccttcgaccgcaggctcggtagacgatgcaagagaggctttcctc
gtggaactcgcatcttttcacttgtcgcttaagaagagccttatggtgtgcgaggcggag
gcgaggcaggttgaggagtaccagagagagaaggagcgcatcgaacaccaacgtgtcttg
ttgagagaccagcttgaggaactaaagcaggctctggagcatgcacaggtgcagcgaaga
cgaaagatggagtacgacgtgattgcagagaagattcataccatcccaagccgagaagag
cttgagcagacgatcaactcgctcgagagtgatatggcagccatacgcgcagagcacgaa
gagcaaacacgcgtattgcgagcacagcagtccgcgttggacgatgtgatatcccacatc
cgggacttacgtcttctcgccaacccggacatcgatgctatagagcaagctcagcgcggc
tcacccgccccagaaacgcagcctagcgaagatactgatgtgccttcagagccgcggaca
agagaggagacaggcgagatccaggaaacgcctgaatctgacaaagatacgcaggctggc
ggagcctcctcgtcgaagtttctgaacccatccgcacagcccttcgttcctggcgcgact
acatcgcgcatagcgactccacagacggctgcaccaacgccaacaccttcagtagacccg
agggccgaggagcaagaggaaggagaggcagacgacgacgtagagatgggagaacttgca
gaggaacctggagagagaccggtaacgaagaaaaaagttagagaggagctggaagagggc
gaggccagcgattctgacctcgatagcgagctgacgcagctctcggatgactga
DBGET
integrated database retrieval system
