Phanerochaete carnosa: PHACADRAFT_114987
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Entry
PHACADRAFT_114987 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pco
Phanerochaete carnosa
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pco03016
]
PHACADRAFT_114987
Enzymes [BR:
pco01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PHACADRAFT_114987
Transfer RNA biogenesis [BR:
pco03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PHACADRAFT_114987
Prokaryotic type
PHACADRAFT_114987
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
18907727
NCBI-ProteinID:
XP_007392337
JGI:
Phaca1_114987
UniProt:
K5VA80
LinkDB
All DBs
Position
Unknown
AA seq
867 aa
AA seq
DB search
MSTTRPRDEDENTGASSPKRARLDEPEHTSEGVVVTDAPEAAPAEEKKVESLLPPSHTLL
GAPEPVYTPDGSMQYIMETDVGISEYVGHDIPRIQGIIKQRFTDFLVYEVDLDGNVVHLK
NIGKPESSPKKATGQTTSASGDATPTENPETSTQKAETEAKAKTLGEQAPEENEPWPQRF
TEILKPFLSEPVMEKVKALYLEGPEPPFISDSGWDGRQSKPAESEGAGESSSITHQEEPE
KSERNKKGKGRGGRGGRGGRGGKAGREGGRNGRPAEREDHRKVLSDPISSKETRTGLHQA
IRTLFGGKLETETDTNAPATDEGSKIIIKWSKAGARGGRGADRGGRGGHRGERGSYPPYV
HFTLQKTNRDTQDALAHLSRSLHCSVKDLSVAGTKDKRGVTVQRVSLRRGNKTVEDVWRT
ANGLGGRRSTEDVLTRRGERGIRIADLNYRRASLELGMLKGNAFVITLRNVQVDSLDTLD
RAMNTIKTKGFINYYGMQRFGTAAIPTHSIGLALLKSEWHKAVDLILRVRPGEHPEVTAA
RNAWLVDGDLDRALELMPRRVVAERCILESFKKQGGDTRNAMGALSTIPRSLRLMYVHAY
QSYVWNAIVSERIRLYGAEKPAVGDLVFETDGENAEATAATAADDGDDAGAETVAESPED
ELLIEEKAEEVSKPGGAQGDEDAPAGKPAKRSRKPWEPPRVKALTEANVDKHTIFDVIMP
LPGRDVSFPGGALGERYKDFLRADGLDPEHFERKQKEYSLGGSYRKILHLPKELSWSVLR
YTDPDVALAQADEDQLLGFDVPAVDADGKFMALQVRLQLGTAAYATMALREVTKTETSSH
FQSGLTQASEDQKYRAVAAEGVEADES
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgaccagaccacgcgacgaggacgagaacacgggcgcgtcgtcgcccaagcgg
gcgagacttgacgagcccgagcacaccagcgagggtgtggtcgtaactgacgcgcctgag
gcggctcctgcggaggagaagaaggttgagagcctgctgccccctagccacactctgctt
ggtgcacctgaacctgtgtacactccggatggctccatgcagtacatcatggagaccgac
gtcggtatctccgagtacgtgggtcacgacatcccacgcatccagggtatcataaaacaa
agattcacagacttcttggtatacgaggtcgacctggacggcaacgttgtacacttgaaa
aatatcggcaagccggagtcttcaccgaagaaagcgactggacagacaacatctgctagc
ggcgatgctacgcccaccgaaaatcctgaaacctcaacccaaaaggctgagactgaggct
aaagcgaagacacttggtgaacaagctcccgaagagaacgagccttggccacaacgcttc
acagagatcctcaaacccttcctgtcggagcctgtcatggagaaagttaaggctctgtac
ctcgagggccccgagccgccatttatcagcgacagcggctgggacggacgtcaatccaag
cctgctgaaagtgaaggtgctggagagagcagttctatcacgcatcaagaagagcccgaa
aaatccgaacgcaataagaagggcaagggtcgtggtgggcgtggtggacgtggtggacgt
ggtggcaaggccggtagggaaggcggaaggaacggccgccccgccgaacgcgaagatcac
cgcaaagtcctgtcagatccaatctcgtctaaagagacacgaacaggcttgcaccaagct
attcgaaccttgttcggtggtaagctcgaaactgagactgataccaatgctcctgctacg
gacgaaggctcaaaaatcataatcaagtggtcgaaagcaggggccagaggcggacgtggc
gctgaccgtggtggacgcggtggccaccgtggcgaacgtggttcataccctccatacgtc
cactttactctccaaaagaccaaccgggatactcaggatgcacttgcacacctatcacgc
tcattacattgtagtgtcaaggacctttcggtcgcgggtaccaaggacaagcggggcgta
actgtccaacgagtatcgcttcggagaggaaacaaaactgtcgaggatgtctggcggacc
gcaaatggactcggtggtcgtcgctctacggaagatgttctgacaaggcgcggtgagcgc
ggcatccgtatagcggatttaaactacaggcgtgctagcctcgagctcggtatgctcaaa
ggcaacgcgttcgtcatcactttaagaaacgtccaagtcgactcgttggacacgctcgac
cgcgcgatgaacactatcaagaccaagggtttcatcaattactatggcatgcagcgcttt
ggcacggccgcaatcccgactcactctattggcctcgcgctgctcaagtctgagtggcac
aaggccgtcgaccttatcctgcgcgtgcgtccaggcgagcaccccgaggtaacagcggca
cggaacgcgtggctcgtcgacggcgacctcgaccgcgcgctcgagctcatgccgcgccgc
gtcgttgcagagcgatgtatcctcgagagcttcaagaagcagggtggcgacacgcgtaac
gcgatgggcgcgctttccacgatcccgcgcagcctacggctaatgtacgtgcacgcgtat
cagtcatacgtctggaacgccatcgtgagcgagcggatccgcctgtatggcgcagagaag
cccgccgtgggtgaccttgtcttcgagacagacggcgagaacgcagaggcgactgctgct
acggctgcagatgacggggacgacgcgggtgcagaaaccgtggccgagagcccggaagac
gaactgctcatcgaggagaaagcagaggaggtgagcaagccgggtggtgcacagggggat
gaggacgcgcccgcgggcaagcctgcgaagcggtcccgcaagccctgggaaccgccgcgg
gtgaaggcgctcacggaggccaacgtcgacaagcacacgatcttcgatgtcatcatgccg
ctgcccggacgcgatgtatccttccctggtggcgcgctcggcgagcgctataaggacttc
ctccgcgccgacgggctcgaccccgagcatttcgagcgcaagcaaaaggaatacagcctc
ggcgggtcgtaccgcaagatcctgcacctcccaaaggagctctcgtggtccgtgctgcgg
tacacggacccggacgttgcgctcgcgcaggcggacgaggaccagctgctcggtttcgac
gtgcccgcagtcgacgcggacggcaagttcatggcgctgcaggtgcgcctccagctcggc
acggctgcgtacgccacgatggcgttgcgcgaggtgaccaagaccgagacgagctcgcac
ttccagtccggcctcacgcaggcgagcgaggaccagaagtacagggctgtggccgcggag
ggcgttgaggccgacgagagctag
DBGET
integrated database retrieval system
