Phanerochaete carnosa: PHACADRAFT_116507
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Entry
PHACADRAFT_116507 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
pco
Phanerochaete carnosa
Pathway
pco03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PHACADRAFT_116507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pco03400
]
PHACADRAFT_116507
DNA repair and recombination proteins [BR:
pco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PHACADRAFT_116507
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
PINA_C
Motif
Other DBs
NCBI-GeneID:
18907769
NCBI-ProteinID:
XP_007393312
JGI:
Phaca1_116507
UniProt:
K5WFB1
LinkDB
All DBs
Position
Unknown
AA seq
1277 aa
AA seq
DB search
MAPAFQKPPAKDGQNASKMKQKSLMSFFSKPPTTSTSTPNGASAKPLAAASNSDTSSDPV
LPEARTPVSKKTPGSGVVADASYTRSSDDASSFAQTPPTSDPIDVDMLSAEEDEGKAKNS
KSAATVARKKRKIILEDSDEDMQDLDVEAYQKGLSAYKPSPEPQEKKGRAKKQRIAVMLS
DDEDEDESAVTSFSQRLTKFRPPEKAEPKRRASKVDDDDDFVVPDDASEDEDEEASPTSH
GQSRTSGSSSRASSRLSNYAHTSASEGEEGLPEPSSRRERPKLAKKSIPKGGSSNIFLTA
AEQRQQAQKEEKKSNEDPFGFLVDVRDKDGVRPSEPGYDPRTLYIPPKAWKAFTPFEKQF
WEIKQNHFDTVLFFQKGKFLELYEEDARIGHQEFDLKLTSRVKMSMVGVPEQNFNFWAAK
FLAKGYKVGRVDQAETALGAEMRLAADKGKTKAKAAAGADKIVRRELNKVYTNGTLVDEA
LLTDDQAGHCVSIREEGEEDPKTGKQKFGLCVLDSSTSEFNLSAFEDDICRTKLETMVRQ
LRPKEIVFTKGNISVPTMRLLKAILPSNCLWTSLRDCEGLSFDATIKALKELYPSSLDDD
DDLEPRPHSLSKSVPEAILNMVRYEGAVEALGSMIWYLRTLNIGNDILSMKNFNVYDPMK
RGQGLVLDGQTLAHIEVLVNSEGTEDGSLLKLLSQCITPSGKRLFRIWLCMPLRDIADIN
ARLDAVQDLIDHPTFEAEFNEVAKGLGDLERIVSRVHAKNCKVKDFLKVLDSFKTLSKGL
SALADTAEGFKSRTVFGLLRSAPDLAPHIKNVKAMFEITEGSDELMPREGKDEEYDSVME
EINELERTLETELKKLEKKLGIKLSYWHSAQGTKEIYLVQTKPNEDVPRSWTKSGSTKAA
ARWTVPELAPTIRSLKEARENRNTAIKSFKHRVYAEFDKDRSVWLRAVRVLSELDCLFSL
AKASVALGEPACRPELVAGDEAFVDFEELRHPALSVSAGFKGDFIPNDVKLGENVGRIVL
LTGPNMGGKSTAMRMTAAGVIMAQLGMFVPAKRAKLCPVDAILTRMGAYDNMFSNASTFK
VELDECCKILREATPRSLVILDELGRGTSTYDGMAIAGAVLHQLATHTLSLSFFATHYGS
LTDDYAYHPNIRNMHMATHVDDENRELIFLYKLVEGVASSSFGTHVANLAGVPQEVIQRA
EIVSDNFAKQFKEKMEGNKRSGASRLPLPVQADFSYLFHLAAGKAELPADKVRRREVLKV
LKAAVKGYLSHAAATVA
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atggcaccagcatttcaaaagccaccggcgaaagatggccagaatgctagcaaaatgaag
cagaagagcctgatgtccttcttctccaagccacccactacgtcgacctcaacacccaat
ggtgcgtcagcgaagcctttggcggctgcaagcaactcagacacgtcttcagacccagtc
ttgccggaagcgcggactccagtgtcaaagaagacaccaggttcaggtgtcgtcgcggat
gcgagctatacgcgtagctccgatgacgcgagcagttttgctcagacacctccgactagc
gaccccattgacgtagacatgctgtccgcggaagaggatgaagggaaggcgaaaaactcc
aagtctgctgccaccgtagctaggaagaaacgcaagattatcctcgaagactcggatgag
gatatgcaagacttagacgtggaggcgtaccagaaaggtttatccgcatacaagccgtct
cccgagccacaagagaagaaaggccgtgcaaagaagcagcgcatcgccgtcatgctgtcg
gatgacgaagatgaagacgagtcagctgtcacatccttctcgcaaaggcttacgaaattc
aggcctccggaaaaggctgagccaaaacgtcgggcatctaaggtagatgacgacgacgat
ttcgtcgttcccgatgatgcttctgaagacgaagacgaggaggcctcgcctacttcacac
ggccagtcgagaacatcagggtcttcttcgcgcgcgtcctcccgcctttccaactatgcg
catacatctgcctctgagggcgaagaaggccttccggagccgagctctcgtcgcgagcgc
cccaaactcgccaaaaagtccattcccaagggtggtagcagcaacatcttccttaccgca
gccgagcagcgacagcaggcacagaaagaagagaagaagagcaacgaagatccgtttggc
ttcttggttgacgttcgggacaaggacggtgtacgccctagtgagcctggatacgatcct
aggacgctgtatataccaccgaaagcctggaaggcgttcacaccctttgagaaacagttc
tgggagatcaagcaaaaccactttgacactgtcctgttcttccagaagggcaagttcttg
gaactatatgaggaagacgcgcggattggccaccaggagttcgatctcaagctcacgtcg
agggtcaagatgagcatggtcggtgtgcccgaacagaacttcaacttctgggcagcgaag
ttccttgcgaagggatacaaggttggtcgcgtcgaccaggctgaaacggcattgggtgcc
gaaatgcgcctcgccgcagataagggcaagacgaaagcgaaggctgccgcaggcgctgac
aagattgtgcggcgcgagctgaacaaggtgtacacgaacgggactcttgtcgacgaggca
ctgctcacagacgatcaagcgggtcactgcgtttctattcgtgaggagggggaggaggat
ccgaagaccggcaagcagaagtttgggttgtgtgtgctcgacagcagcacgagcgagttc
aacctcagcgcatttgaggacgatatatgtcgcacgaagctcgagacgatggtcagacag
ctgcgaccaaaggagattgtattcaccaagggcaatatttctgtcccaacgatgcgtttg
cttaaggccattctgccatcgaactgtctgtggacaagcttgcgggactgtgaaggtctg
tccttcgatgccaccatcaaagcgctcaaggagctctatccctcctctctggacgacgat
gacgacctggagccgcgaccccatagcctcagcaaatccgtgccagaggcgatactcaac
atggttcgctacgagggcgcagtcgaggcactcggctcgatgatctggtacctacggacg
ctcaatatcggcaacgacatcttgagcatgaagaatttcaacgtgtacgacccaatgaag
agaggacagggcttagtactggatgggcaaaccttggcacacattgaagttctggtcaac
agtgagggtacagaggacggttcgttgctcaagctcctcagtcagtgtatcacaccttcc
ggcaaacgactattccgtatttggctttgtatgcctcttcgagatatcgcagacatcaat
gcccggctcgacgcagtgcaggacctcatcgaccatcccacctttgaggccgagttcaac
gaggtcgctaaaggcctcggtgacctggagcgcattgtatcgcgcgttcacgcgaaaaat
tgtaaggtgaaggacttcctgaaagtgcttgattcattcaagacccttagcaaggggctc
tccgcccttgccgacacggccgaaggcttcaagtctaggactgtctttggcctccttagg
tctgctccggacctggcgcctcacatcaagaatgtgaaagcaatgttcgagattactgag
ggtagcgacgagctaatgcctcgcgagggcaaggacgaggagtacgattcagttatggag
gaaatcaatgaattagagcgaactctggaaacggagctgaagaagctcgaaaagaagcta
gggatcaagttgtcgtactggcatagtgctcagggcaccaaggaaatttacctggtgcag
acgaagcctaacgaagacgttccacgcagctggactaagagcggcagcacgaaagccgcc
gctcgatggactgtccctgagctcgccccaacgattcgatcgctcaaggaggcgcgcgag
aaccgtaacactgcaatcaagtctttcaaacatcgggtgtatgctgagttcgacaaggac
cgctccgtgtggctgcgcgctgtgcgcgtgctttcggagctcgactgccttttctcactc
gccaaagcctctgtcgcactcggtgagccggcatgcagacccgagcttgtcgcaggtgac
gaggcatttgtcgactttgaggagctgagacatccggcgctgagcgtcagcgctgggttc
aagggcgatttcatccccaatgatgtgaagctcggtgaaaacgttgggaggatagtgcta
ctgacgggcccgaatatgggaggcaaatctacggccatgcgtatgaccgctgccggagtg
atcatggcccagctcggaatgtttgtgccagcgaagcgggctaagctatgccctgtggac
gctatccttactcgcatgggtgcctatgacaacatgttctcgaatgccagcacgttcaag
gtcgaattagacgaatgctgcaagattttgcgagaggccaccccgcggtcactggtcatc
cttgatgagcttggaagaggtacttcgacttatgacggcatggctattgcgggcgcggtc
ttacatcagcttgcaacccataccctgtcgctatcattctttgcgacccactatggctcg
ttgacggatgactacgcatatcaccccaacatcaggaacatgcacatggcgactcatgtc
gatgacgagaacagagagctcatcttcctgtacaaactcgtcgaaggcgttgcctcctcc
tccttcggcacacatgttgccaacctcgctggggttccacaagaagtcatacagcgcgcc
gagatcgtctcagacaattttgcgaaacagttcaaagaaaagatggagggcaacaagcgg
agcggcgcctcgcggctgccgctgcccgtccaagcagacttttcctatctctttcatctg
gccgcggggaaggcggagctgcccgcagataaggtccgcaggagggaagtgctcaaagtc
ctgaaagcggctgtgaaggggtatttgagccacgcggcagccactgtcgcttag
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