Phanerochaete carnosa: PHACADRAFT_119030
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Entry
PHACADRAFT_119030 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K08734
DNA mismatch repair protein MLH1
Organism
pco
Phanerochaete carnosa
Pathway
pco03430
Mismatch repair
pco03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PHACADRAFT_119030
03460 Fanconi anemia pathway
PHACADRAFT_119030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pco03400
]
PHACADRAFT_119030
DNA repair and recombination proteins [BR:
pco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
PHACADRAFT_119030
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
18907843
NCBI-ProteinID:
XP_007394773
JGI:
Phaca1_119030
UniProt:
K5VZD8
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MAANHESTASNLNGPKPIRRLEEAVINRIAAGEIIHRPSSALKELLENSLDAKATSIKVS
VEDGGMKLLQIQDNGCGIWKADLPILAERFTTSKITSFQDLERLTTYGFRGEALASVSYV
SQLSVVTKTKSDTCAWKAAYIDGKLASKDGSPTEPKACAGNDGTIITVENLFYNTPTRLS
ALRGSSEEYSRILDVVTKYAVHNPHVSFTCKKSGSASPDITTPSGSSVKQAIGQLYGQTI
AKELLETRISSAGDGVIRVDEEEPWSAEVFFTSPNYQAKKMVFLLFITHRLVESSRIKKA
LETIYTGILPKGAFPFVYLSLQIDSRSVDVNVHPTKREVHFLDEEQITQKIGDAVHAILI
GQNQSKTFEYQTLLTGGTAPTASQSKKGKKRARPDEEDELSEASSSVPLAAPPAAKKPAP
NHKVRTSQQDRTLDSMFPVYTPSQRPSIGDANLGQTQKTVVVKVPEIVVSECNLASVMRL
RQEVEDVKHEELTEILQKHVFVGIVDLGRCLSLVQHSKKLYLMNHGALAEEFFYQLGLIQ
FGDYHRIKLDPSPPLRTLVELAVDVEDTSASKLSKANIVNMIVDTITARREMLAEYFSLE
IDADGNVSSLPLLLKGYTPNLDKLPLFLMRLGPQVDWYSEQKCFQTFLRELAYFYVPEPL
ISGSTDADRADETAMRWQIQHVLFPAMTRYMLPPKTLVDRDVVQVAHLPELYRVFERC
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggcggctaaccacgaatcaacggcgagcaatctgaacggcccgaaacccatacgaaga
ctcgaagaggctgtgataaatcgcatcgctgcaggagaaattattcacaggccgtcttct
gccctaaaggagttactagagaatagcctcgacgcaaaagcgacctccatcaaggtcagc
gtggaagatggcggcatgaagctgctgcagattcaggataatggatgtggtatttggaaa
gcagacctaccgattttggcggaacggttcacgacgtccaagattacctcgtttcaagat
ttggagcgcctcacgacgtacggcttcagaggcgaagctctcgcatcagtctcgtatgtc
tctcaactctccgtggtcacgaagaccaaatcggatacttgcgcatggaaagccgcgtat
atcgacggcaagctggcctcaaaagacggctcacccactgagccgaaagcatgtgctggc
aacgacggcacaatcataaccgtcgagaacttgttctataacactccaacgcgtctgtca
gctttgcgagggtcatcagaagaatattctcggatactagacgtcgtaacgaagtatgcc
gtgcataatcctcatgtctcctttacttgcaagaagtcaggttccgcctcaccagacatc
actacgccatctggttcgtcggtgaaacaggcaataggacagttgtacggccagaccatc
gcaaaggaacttcttgagacaagaatctcttcggctggagatggtgtcatacgcgtcgat
gaggaggaaccctggtctgcagaagtattttttactagccctaactaccaggcaaagaag
atggtttttttgctatttattactcataggctggtggagtcgtcgaggatcaaaaaggca
ctggagactatctacaccggaatcctaccgaagggtgcattcccattcgtatatctcagc
cttcagatcgactcccgttccgtagatgtcaacgtccacccaacgaagcgagaggtacat
ttcctggacgaggagcaaataacgcaaaaaattggcgacgctgtccacgctatcctaatt
ggtcagaaccagtcaaagacattcgaataccagactctgctcactggtggaacggcgccc
acggcttcacagagcaagaagggcaaaaaacgcgctagacccgacgaggaggacgagttg
agcgaggcgagctcctctgtccccttggccgctcccccagccgcgaagaaaccggcaccg
aaccacaaggtccgcacctcacagcaggatcgtacgttggattcgatgttcccagtgtac
acgccctcgcaacggccttcgatcggcgatgcaaatcttgggcaaacacaaaaaactgtg
gtggtcaaagtacccgagatcgttgtctcggagtgtaacttggcatcggttatgcggctg
aggcaggaggtagaggacgtgaagcatgaagagctcacagagatccttcaaaagcacgtt
ttcgttggtattgttgaccttggacgatgtctgtcgttggtacaacattccaaaaagctg
tacctcatgaaccatggtgcattggctgaagagtttttctatcagctgggtctcatccag
ttcggagactaccatcggatcaagcttgatccgtctcctccgttacggacattggtggag
ctggcagtggacgttgaggatacatcagcgagcaagcttagcaaggcaaacattgttaac
atgattgtggacactatcacagcgaggcgcgagatgctcgcggagtacttctccctcgag
attgacgccgacggcaacgttagcagtcttcctcttctactcaagggctacacgcccaac
ctggataagctgcccctgttcctcatgcgtctcggcccccaggtcgactggtactcggaa
cagaagtgctttcaaacatttttgcgcgagcttgcgtacttctatgtcccggagccgctc
atatcgggctcgacagacgcggacagggcagatgagaccgcgatgcgctggcagattcaa
catgtgctcttccccgcaatgacacggtacatgctgccaccaaagacactggtagacaga
gacgtcgtgcaggtcgcgcacttaccagagctgtatcgggtgttcgaacggtgttaa
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