Phanerochaete carnosa: PHACADRAFT_120692
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Entry
PHACADRAFT_120692 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
pco
Phanerochaete carnosa
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pco03009
]
PHACADRAFT_120692
Enzymes [BR:
pco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PHACADRAFT_120692
Ribosome biogenesis [BR:
pco03009
]
Eukaryotic type
Pre-60S particles
Helicases
PHACADRAFT_120692
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
DUF4217
Helicase_C
ResIII
SBF_like
Motif
Other DBs
NCBI-GeneID:
18907889
NCBI-ProteinID:
XP_007395693
JGI:
Phaca1_120692
UniProt:
K5VV33
LinkDB
All DBs
Position
Unknown
AA seq
681 aa
AA seq
DB search
MADSAAFAGVWSSLPTTLTPWILDVLQSMGHTHMTPVQASTIPLFMRNKDVVVEAVTGSG
KTLAFVIPILEKLIRREAKLSGNEIGALVISPTRELANQIHSIFELFLQSQPSAQHSHPT
SPAQSDGDESGGLPESRWEFPPPLLLVSSGSSPAQDLQRFMSTGADIVVGTPGRVEEFLL
GKGNSVVNVKELEILVLDEADRLLDLGFNQTLTRILTHLPKQRRTGLFSATMTDADAVSE
LVRVGLRNPARVVVKVQTKKTKTKAADDQSRKKISDMIEERRIPANLRNFYLICRSSEKL
IQFARLIQHECHHQQSFRFIVYFATCACVDYFYRILPAVLPSYITLHSLHGHLPPAARTK
TLHAFASGVATSTSPQVLLATDVAARGLDLPDVDVVIQFDPPSDPKTFSHRCGRTARAGR
SGRAWTFLVGREIDYVDFLAVRKIPIKERSAFREDGAPLAIAEDDLEDTAVLQTLDKVRY
VVLKDRTLHDKATKAFVSFVRAYSKHEASYIFRIKDLDLIGVAKSFGLLRLPRMPELKDA
SRDEWRDADVDWGRYAHADSAKEASRLAELEKQKQVDAIAAAERLRKQAAEKKKANAAWS
NKMTKREEKEKRKQKKGNKKRWLTQQQSATGDRKRSRVDDGDGDGDKGDDWEDLAREERM
AKKLKRGEISQNEFDSQFPDI
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcggactcagctgcatttgctggggtctggtcatcgttgccgacgaccttaacacca
tggatattagatgtcctccaatccatgggccacacacacatgacaccagtgcaagcgtcc
accattcctttgttcatgcgcaacaaagatgtcgtggtcgaagctgttacgggctctggc
aagaccttggcattcgttatccccatattggagaagctcattcggcgggaagcgaagttg
agtgggaatgagattggtgcactcgtcattagtccgaccagagaacttgccaatcaaatt
cattctatattcgagctgttcttgcagtctcagccgtcggcacaacattcacacccaacg
tccccagctcagtctgacggcgatgaatccgggggtttacccgagtctcgttgggaattc
cctccgcccctactccttgtctcgtcagggtcttctcccgcacaggatctccaacgcttt
atgtcaacgggcgcagacatcgtcgttggtacccctggccgcgtggaggaatttcttctc
ggcaaggggaatagtgttgttaacgtcaaagaactggagattcttgtcttggacgaagct
gatcgcttactagacttgggatttaaccaaaccctcacccgtattttgacacacctgccg
aagcagcgccggacgggtctcttcagtgctacaatgacagatgcagacgccgtatcagaa
ctggtacgtgtgggcttgcggaaccctgcccgggtcgtcgtcaaagtgcaaacaaagaag
acaaaaacgaaggcggctgatgaccagagtaggaagaagatctcagacatgatagaagaa
cgtcgcatccccgcaaacctgcggaatttttatctcatttgccggtcgtctgagaagctg
atccaattcgctcgcctgatacaacacgaatgccatcaccaacaatcgttccgctttatc
gtctactttgcgacgtgtgcctgtgtcgattacttttataggatcctaccggcggtcctg
ccttcatacatcacactgcactcactacacggccaccttccacctgccgcccgcacgaag
accctacatgcgtttgcttctggggttgctacctctacatcaccacaagtattactggcg
acagatgtagcagcaagaggcctggaccttcctgatgtagacgtcgtaattcagttcgat
ccaccgtcagaccccaaaacgttctcacaccgttgtggacgtactgcgcgcgcgggacgg
agtggcagggcatggacttttttagtcggtcgtgagatcgactatgtcgacttcctggcc
gtccgcaagatacctatcaaggaacgctccgctttcagggaagatggcgccccgcttgct
atcgccgaggatgatctagaggacacggcagtgctgcagaccctggataaagttcgctac
gttgtccttaaagatagaacactccacgacaaggcaacgaaggcattcgtatcatttgtc
cgggcatactcgaaacatgaagcgtcctacatcttccggataaaggatctcgacctcatt
ggtgtcgccaagagtttcgggttgctacgcctgccgcggatgcctgagctgaaggatgct
agtcgggacgaatggcgggatgccgacgttgattggggcagatacgcccacgcggactcc
gcaaaggaagcgagccgcctcgcagaactcgaaaagcagaaacaagtcgatgccatcgct
gctgcagaacggctccggaagcaagccgcggaaaagaaaaaagcgaatgcggcgtggagc
aataagatgacgaaaagggaggagaaagagaaacggaagcagaaaaaagggaacaagaag
cggtggctcacgcagcaacagtctgccactggcgacaggaagaggagtagagtcgatgat
ggcgacggagatggcgacaaaggcgacgactgggaagacttggcgagggaggagcggatg
gcgaagaaactgaagcggggagagatctcgcagaatgagtttgacagccagttcccggat
atctag
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