Phanerochaete carnosa: PHACADRAFT_121053
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Entry
PHACADRAFT_121053 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
pco
Phanerochaete carnosa
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pco03019
]
PHACADRAFT_121053
03036 Chromosome and associated proteins [BR:
pco03036
]
PHACADRAFT_121053
Messenger RNA biogenesis [BR:
pco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
PHACADRAFT_121053
Chromosome and associated proteins [BR:
pco03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
PHACADRAFT_121053
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
PHACADRAFT_121053
microRNA pathway
RISC loading complex
PHACADRAFT_121053
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoL1
PAZ
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
18907895
NCBI-ProteinID:
XP_007395847
JGI:
Phaca1_121053
UniProt:
K5W971
LinkDB
All DBs
Position
Unknown
AA seq
724 aa
AA seq
DB search
MSPDATNKSQANNTAVNLLQIIISQAPNIKHHFALHAKSFFIRGDSDRKLAPGLQIWHGF
FQSVRPVLNSIMININTTATAIYTPGPLLEGAMSLLGCRDSRELVQRCKDERAGAQAMRK
LKSFYKGVIVTVGPNKSKRKIEDIVPRAGFVEFEKSGQMSTVQEHFREHHHIALRFPEAF
GVRVGKSAIFPAEVCDVFPGQIYRKQLDGPATTDMLRETAVRPDQRLDNIRKAISRDVSA
LDYGSSPFMRDAGMRVDTNPLETRGRRLQPPGVMYGNGTLHVRDGAWNVVNKTFQLPAKI
IAWAVVSFDANPNAQRSAVHLAQTLCVNMKKLARGAPYQSGQPSKSARGAAMDTVKGFND
PQIKPGFVLVILPANAAPLRKEVKQWGDMLVGIPTQCVRAGKYEQANDQYCNNLALKINT
KTGGINSILHSPISDFLKDCMIVVPPGCDVAHPSPGVTSRPSIASLVASEDEFATRYSTE
VQVQPPRQESIDGIGGMIERAIKRYSEKQRRFPGRIVIYRDGVSEGEYAQVETNEIQAIK
GAILHAVHFRRHTRHKAELIFIVVGKRHHVRFFPKDRSDADRTGNCFPGLVVDREIVHST
YMDFYLQSQGGLKGTSRPSHYIVLKNDANRSADLLQELSFALCHVYAAATRSVSIPAPVY
CEWRFLSGAPRSLLPQRLCTRAVFQFRPELDYADESSTETSEFSLEKWQQGLGQSILKQQ
MYFI
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtctccggacgctacaaacaagagccaggccaacaacaccgcggtgaacctgctccag
atcatcatttcccaggcccccaacattaagcatcatttcgcccttcatgctaaatcattc
ttcatccgaggcgattccgaccgtaaattggcacctggcttgcaaatatggcacggcttc
ttccagagtgttcgtcccgtcctcaacagcatcatgatcaatatcaacaccacagctacc
gctatctacacaccggggcctcttctcgaaggcgcaatgagcctcttggggtgtagggac
tcccgtgaattggtacaacgctgcaaagacgaaagagctggcgcacaggcgatgcgaaag
ctcaagtcgttctacaagggagtcatagtcaccgttggtccgaacaagagcaagaggaag
atagaggacatcgtacctcgtgccgggtttgtcgagttcgagaaaagcggtcagatgtca
actgtgcaggaacattttcgcgagcatcatcacattgcgctccgcttccccgaagccttt
ggtgtccgtgtcggcaagagtgctatcttcccggcggaagtgtgtgacgtcttccctggt
caaatatacaggaagcagctcgatggcccggccactactgacatgttgagggagacggct
gtgaggcctgaccagcggctcgacaacatcaggaaggcgatctcgcgtgacgtgagtgcc
ttggattatggaagttcgcccttcatgcgggatgctgggatgagggtcgacactaaccct
ttggaaaccagagggcgtcgtctccaacctcccggtgtaatgtacggtaacggtacattg
catgtgagggacggagcttggaacgtcgtcaataagacctttcagctcccggccaaaatc
atcgcatgggctgttgtgagcttcgatgcgaatcccaatgcgcaacgcagtgcagtccat
ctcgcccagactctttgtgtcaacatgaagaagctcgcaagaggagccccatatcagtcc
gggcaaccaagcaagagtgcacgaggtgctgctatggacaccgtcaagggattcaacgat
ccgcagataaagccaggctttgttcttgtgatcttgcccgcaaacgcagctcccttgcgg
aaggaggtcaagcaatggggcgatatgcttgtgggcatccctacgcagtgtgtgcgtgcc
ggcaaatatgaacaagccaatgaccagtattgcaacaaccttgccttgaagatcaatacg
aagactgggggcatcaactccatccttcactctccaatttctgatttcctcaaggactgc
atgatagttgtgccgccaggttgcgatgtggcccatccctctcctggtgtcactagccgg
ccttcaattgccagcttggtggcatcagaagacgaattcgccactcgttactctactgag
gtacaggtacagcctccacgccaggaatctatagacggcatcggtggtatgatcgagagg
gctatcaagcggtactcggaaaagcaacgcagattccccggccgtattgtcatatatcgg
gatggcgtgtcagaaggcgagtatgcacaggtcgaaaccaatgagatccaggctattaaa
ggtgcgattctacacgctgtgcacttcaggcgacacaccagacacaaggcggagcttatc
tttattgttgtcggcaaaaggcaccacgtgcgcttcttccccaaggacaggtccgatgca
gaccggacgggtaactgcttccccgggctggttgtcgaccgagagatcgtccattccacg
tacatggacttttacttgcagtctcagggtggactgaaaggaacctcccgtcccagtcac
tatatcgtgctcaagaacgatgccaaccgctctgctgacctgctccaagagctgtcgttc
gcgctgtgccatgtctatgccgccgcgacacgttcggtttccatccctgccccggtgtac
tgtgagtggcgattcctctcgggagctccgcgcagccttcttccgcagcggctgtgtact
cgcgccgttttccagttcaggccggaattggactatgcagacgagagctcgaccgagacg
tctgagttcagccttgagaagtggcagcaaggcctcggccaatcaatactgaaacagcag
atgtacttcatctga
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integrated database retrieval system
