KEGG   Phanerochaete carnosa: PHACADRAFT_130422
Entry
PHACADRAFT_130422 CDS       T03128                                 
Name
(RefSeq) hypothetical protein
  KO
K12828  splicing factor 3B subunit 1
Organism
pco  Phanerochaete carnosa
Pathway
pco03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pco00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PHACADRAFT_130422
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pco03041]
    PHACADRAFT_130422
   03036 Chromosome and associated proteins [BR:pco03036]
    PHACADRAFT_130422
Spliceosome [BR:pco03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    PHACADRAFT_130422
 Complex B
    PHACADRAFT_130422
 Complex C
   U2 SnRNP specific factors
    PHACADRAFT_130422
Chromosome and associated proteins [BR:pco03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    PHACADRAFT_130422
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_2 HEAT_ECM29 HEAT Adaptin_N Vac14_Fab1_bd XMAP215_CLASP_TOG Htt_N-HEAT_1 DUF3110 Condensin2nSMC
Other DBs
NCBI-GeneID: 18908168
NCBI-ProteinID: XP_007401165
JGI: Phaca1_130422
UniProt: K5WIA6
LinkDB
Position
Unknown
AA seq 1147 aa
MSSDEPRLVDSFTAPKEVLQEFAELAEEEDFDPFAETASKRQIAARQSDYHNRRFSRVAN
ESADAFKAADEGQDVEGGYKDAMRLQMLEREEQRVRRAIEEKERQAREEGKEKMDLDRTP
PREELMEAAQELAQSSGAKRKRRWDVSEPSDENADVKMEDKGEWSKEALEQATPKKRRSR
WDATPADVTNVGETPKRSRWDQAPAAQPEPAMTPIIMNAPGVMHDDKHNRYLTDEELDAI
LPSQGYQIVTPPPGYAPVVRPPKFANPVTEVGGFHIQEGSDAAAAAAAAGLAPELPTEIP
GVGSLAFFKAEDAQYFAKILKEEDETELSVEEMKERKIMRLLLKIKNGTPPVRKTALRQI
TDKAREFGAGPLFDKILPLLMERTLEDQERHLLVKVIDRVLYKLDDLVRPYVHKILVVIE
PLLIDEDYYARVEGREIISNLSKAAGLAHMISTMRPDIDHADEYVRNTTARAFSVVASAL
GIPSLLPFLKAVCRSKKSWQARHTGIRIVQQIAIMMGCAVLPHLRNLVDCIAHGLQDEQQ
KVRTMTALALAALAEAAAPYGIESFDNVLKPLWVGIRLHRGKSLAAFLKAIGFILPLMDP
EYVSYYIKEVTIILIREFQTSDEEMKKIVLKVVQQCAATEGVTPQYIKQDILPDFFKAFW
VRRMALDRRNYRQVVETTVELAQKSGVAEIVGRIVNDLKDEAEPYRKMVMETITKVVASL
GASDVDERLEVRLVDGIIYAFQEQTTEDQVMLDGFGTVVNALGIRVKPYLTQIVSTILWR
LNNKSAKVRQQAADLTTRLAVVIKQCGEDQLLNKLGLVLFEQLGEEYPDTLGSIIAAEGA
IANVVGMTQMNPPIKDLLPRLTPILRNRHEKVQEATINLIGRIADRGAEYVPAREWMRIC
FELLDLLKAHKKGIRRAAVNSFGYIAKSLGPQDVLQVLLTNLRVQERQSRVCSTVAIAIV
AETCGPFTCLPAILNEYRTAELNVRTGCLKALTFVFEYVGPQSAYYVDSVVTMLEDALTD
RDLVHRQTASVIVKHLALGVAGLGCEDSMMHLMNLVWPNCFETSPHVIGAVMEAVEAMRV
TLGPGVLLSYTLQGLFHPARKVREVYWRVYNSLYLGAADALVPFYPDLGELSEGQNVYDR
HPLQMFI
NT seq 3444 nt   +upstreamnt  +downstreamnt
atgtcctcagacgaaccccgcttagtcgactcattcacggcaccgaaagaagtgcttcag
gagtttgcagaactcgcagaagaggaagacttcgacccgtttgccgagaccgcgtcaaag
cgacagatcgccgctcgccagtccgactaccacaaccgcaggttcagccgcgtagcgaac
gagagcgcagatgcattcaaagctgcagacgagggacaggatgttgagggcggctacaag
gatgctatgaggttgcagatgttggaacgggaggaacaaagagtcagacgagcaattgag
gagaaagagagacaagcgagggaagaggggaaggagaagatggacctggacaggacacca
ccgcgcgaggaactcatggaagctgcccaggagctcgctcagtcttccggcgccaagcgc
aagcgtcgatgggacgtgagcgaaccgtccgacgagaatgccgacgtcaagatggaagac
aagggtgagtggtccaaggaggcgttggagcaggctacccccaaaaagcgtcgctctcgc
tgggacgctacccccgcagatgttaccaacgttggcgagacaccgaaacgttcccgctgg
gaccaagcacctgccgcacagcctgagccggccatgactcccattatcatgaacgccccc
ggtgtcatgcacgacgacaagcacaacaggtaccttaccgatgaggagcttgatgccatc
cttccttcgcagggctaccagatcgtcactccaccaccgggctacgctcctgtcgttcga
cccccgaagtttgcgaatccagtcactgaggtcggtggattccacatacaagagggctcc
gacgcagccgcagccgcagccgccgcaggcctcgctcctgagcttcccactgagatccct
ggcgttggcagccttgcattcttcaaagccgaagatgcgcaatacttcgccaagattctc
aaggaggaggacgagacggagctttcggtggaggagatgaaggagcgcaagatcatgcgt
ctcctgctcaaaatcaagaacggtacgcctcccgttcggaaaaccgctctgagacagatt
accgacaaagcccgtgaattcggtgctggtcctttgttcgacaagattctgcctctgctc
atggagcgtacgctggaagaccaagagcgccacttgctcgtcaaggtcatcgaccgtgtc
ctctacaagctcgatgacctcgtccgcccttacgtgcacaagatcctcgtcgtcatagaa
cccttgctcatcgacgaagactactatgctcgggttgagggtcgtgagattatctcgaat
ttgtcgaaggctgccggccttgcccacatgatctctaccatgcgaccggatatcgaccac
gccgacgagtacgtccgtaacaccaccgcccgtgccttctctgtcgtggcatccgctctt
ggtatcccctcgttactgccgttcttgaaagcagtttgccgcagcaagaagtcgtggcag
gctcgtcacaccggcatccgtatcgtccagcagatcgctatcatgatgggctgtgccgtc
cttccccacctccgcaatcttgttgactgtattgcccatggcttacaggacgagcagcag
aaggtccgcacgatgaccgctcttgcgcttgcggccctcgccgaggccgctgctccgtac
ggcatcgaatcgttcgacaacgtcctcaagccactttgggtcggtattcgtctccatcgc
ggcaagagtttggcggcgttccttaaagccatcggttttattcttccgctcatggatccc
gagtacgtatcgtactacatcaaggaagtcaccatcattctcattcgagagttccaaacc
tcggacgaagagatgaagaagatcgttctgaaggtcgttcagcagtgtgctgcgactgaa
ggtgtcactccgcagtatatcaagcaggacattcttcccgacttcttcaaagcgttctgg
gtccggcgtatggccctcgaccgtaggaactatcgtcaggtcgttgagaccaccgtcgag
cttgcgcagaagtccggtgtcgccgagatcgttggacgcattgtcaacgacctcaaggac
gaagcggagccgtatcggaagatggtcatggaaactatcaccaaggttgttgcgtctctc
ggcgcgtccgacgtcgacgagcgactcgaggtccgcttagtcgacggtatcatttacgcc
ttccaggagcagacaaccgaggatcaggtcatgctcgacggcttcggaactgttgtaaac
gctcttggcatccgcgtgaagccgtacctcacccagattgtctcgactatcctttggcga
ttgaacaacaagagcgctaaagtccgtcagcaggcagccgacctcactactcgcctcgct
gtcgttattaagcagtgcggtgaggaccagctgctaaacaagctcggccttgttctattc
gaacagctcggtgaggagtaccctgatactctcggcagtattatcgccgccgagggagcg
atcgccaacgtcgtcggtatgacgcagatgaaccctccaatcaaggatctcttgccccgc
ctgacgcctattctccgtaaccgtcacgagaaagtccaggaagcaacaatcaacttgatt
ggtcgtatcgccgatcgtggtgctgagtatgtacccgctcgcgaatggatgcgtatctgt
ttcgagctgctcgatttgctcaaggcgcacaagaaaggtattcgccgtgcggctgttaac
tctttcggttacattgccaagagcttgggtcctcaggatgtgctgcaggttctactcacc
aacctgcgcgtgcaagagcgtcaaagtcgtgtctgcagcactgtcgccattgccatcgtc
gccgagacttgcggtcccttcacctgtctccccgccatcctgaacgagtaccgcacagct
gagctcaacgttcgcacgggatgtttgaaggcgcttacattcgtcttcgaatacgtgggc
ccgcagtccgcctactacgtcgactcggtcgtcaccatgctcgaggatgcgcttacggac
cgcgacctcgtccaccggcagaccgctagtgttatcgtcaagcaccttgctcttggcgtt
gctggcctcggctgcgaggactcgatgatgcatctcatgaacctcgtgtggccaaattgt
ttcgagacttcaccgcatgttatcggtgcggtcatggaggcggtcgaagcgatgcgcgtc
acgcttggaccaggggtgctgctgagctacacgctacagggtctcttccatcccgcgcgg
aaagtccgagaggtctattggcgtgtttacaactcattgtacctcggcgcggcagatgcc
ctcgtaccgttttatcccgacctcggcgagctgagcgagggtcagaacgtttatgaccgc
cacccactgcagatgttcatctga

DBGET integrated database retrieval system