Phanerochaete carnosa: PHACADRAFT_134380
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Entry
PHACADRAFT_134380 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K24155
rabconnectin-3a
Organism
pco
Phanerochaete carnosa
Pathway
pco04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
PHACADRAFT_134380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pco04131
]
PHACADRAFT_134380
Membrane trafficking [BR:
pco04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
PHACADRAFT_134380
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
PHACADRAFT_134380
RAVE complex
PHACADRAFT_134380
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
Beta-prop_WDR5
Beta-prop_THOC3
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
18908297
NCBI-ProteinID:
XP_007390572
JGI:
Phaca1_134380
UniProt:
K5WNV8
LinkDB
All DBs
Position
Unknown
AA seq
1301 aa
AA seq
DB search
MQALAFWEAFPGTLHGNEAIRCLAVDPGMKLIVATMGVRLATWALSGVRGDTWRVHSTLV
LPEGGPVIAIDCKSGLLAISTTSSLSVYTLILENDLPTWSNKWTLSISGLSRLRLSPSLM
YIASTSTLDNVVRVYLTTSGKQTQQIRHPRPVIDMNWRRSPASSRDDLTLYTITLDATLR
VYLPVIDAPHRMHLHASLDVYSATPSSIASHATSSRIFWLDREVMSEALVAALSKIKPEQ
EDGRGRRVSEIQEEGWDLFLRVFSDGSLVVQAVANIDRRPPTLLKQFTLLHSAPSTLPSI
PDHLYLLPNPADCGTPSLVTSAPLMSHKLDPLPFFDACSDGLALQGNVQDVRSRHSSALP
RRISRFVRTPDGEGLGILRQDGTAEVWKTSPGARRVFLHAAVTDSIEPITIMAVLQGGQY
FATYSNSSRTVTLQSAHALKSSSVEVPPIMSLFPLPSSEGLSASFIAITETHTILIFNAF
LPEPSSMPSENPAISLSLHSETSLPLTLRLKTLVPVDPMAWSNPDRMKTFVGSHDALLSV
SESGELAFWIPDVSSKPATWRCTGHVRTRRTNILMAACSSAKKTILVCKTSEGQEVTIWN
STESEFATGLEYRRVYGSSDPILDLDWTATPDGQSILAVGYAHRVELLCQQRMTYFDDTP
GWGICWKIDLTNTIPHQINDSIWLKGGSLLVGTGHLMSLYGQVPSIADSREESLFEHVAR
HNGPLDEYHPQMILQCLLWEKVELVKNIVINLAKNIRWTRDTYEWKTLPTEEFLKKDETA
RAIHASSKPRYSSLFTVPETADESDAEQFSSDLVQKLVERLEEEPLPHLTPNEKDALIVL
MQATLEIERQRRALDSNGLRYLISMRVFYIFNRRLSSPSSPSSNGTLSGRTHKRERLRYR
DMLWAFHSESQGLLLSTSVASCEGQKMRWSDARALGVYIWLRSIETMKAHMEVIARNQYM
AGDNRDPTECSLFYFALGKAKLVHGLWRQASWHKEQNPMLKFLNNDFSQPRWRTAALKNA
FALLSKRRFEYAAAFFLLGDSLKDAVNVCLRNLQDFQLAIALARVVEGSDNGPVLRSILE
SAVIPTAFREGNRWLASWAFWMLHRRDLAVRILITPLSDMANVWTGITEIGESHYDDPSL
ALLFSQLKLKTLQTAKGTSEVSGRTEFNFVLQIARVFCRMGCHALALDLVRTWSFERPST
VVHDSPVIRHPPSPIIARFALEPGMRRQSSIMIDMDIPTEPPTRSASPIRGLPNGAGPSS
DAEVLEESNGDLVARKAGMGRLLKSAKQDVQVPEFDMNAFF
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccctcgcgttctgggaagcatttccaggtacattgcacggaaatgaagctata
cgctgtcttgccgtcgatccaggcatgaagcttatcgtagccacgatgggcgtgcgtttg
gcgacatgggccttgtctggtgtgcgaggtgatacatggcgcgtgcactcgacgctggtc
ttgcctgagggaggccctgtgattgcaatagattgcaagtcagggttgcttgctatcagc
actaccagttctctctcagtctacacacttatccttgagaacgacctcccaacgtggtct
aacaaatggactttatccatatcaggactgtcacgcttgcgattatccccatctcttatg
tacattgcgagcacatctacgctggataatgtcgttcgtgtgtatttgaccacaagtgga
aagcagacgcagcaaatacgacacccaagaccggtaatagatatgaactggagacgttcg
ccagcttccagtcgagacgatctgacactgtataccataactttagacgctaccctaaga
gtttatctcccagtcatcgacgcccctcaccgaatgcatcttcatgcatctttagatgtg
tactctgccacaccatcttccatagcctctcacgctacgagctcccgcatcttctggctt
gatcgagaagtcatgtccgaggcactcgttgccgccttatctaaaatcaaaccagaacaa
gaagatgggcggggcagacgggtgagcgagattcaggaggagggctgggatctcttcctg
cgcgtattttcagacggctcgcttgtcgtgcaggctgtagctaatattgatcgacgtcct
ccaacactcctaaaacaattcactttgctgcactctgctccttctactcttcccagtatt
cccgaccatctgtatctcctaccaaaccctgccgattgtggaacgcccagcctggtcacc
tccgcgccgctcatgtcgcataagctcgacccactaccattcttcgatgcctgttccgac
ggtcttgcgctacagggcaacgttcaagatgtgcgaagtaggcacagctctgcgcttcct
cgtcgaatatcacgatttgtgcgcactccggatggagaagggctgggtatactcagacag
gatggcactgcagaggtgtggaagacgagtcctggtgcacgaagggtcttcttgcatgcc
gcggttactgatagtatagaaccaatcactattatggctgtattgcaaggtggccaatac
ttcgcgacctactccaattcctcacgtactgtgaccttgcaatcggcacatgctttgaaa
tcgtcttctgtagaggttcctccgataatgtcgctctttccgctgccatcgtctgaagga
ttgtcggcctcgttcatcgccattaccgagacgcatacaatattgatcttcaatgcgttt
cttcctgagccctcgtcgatgccttcggagaaccccgccatctcactctcgttgcactcc
gagacctctctgccgctcacgctccgtctcaagaccctcgttcctgtggatcccatggca
tggtcgaatccagaccggatgaagactttcgttggttcacatgacgcactgctcagtgtt
agtgagagcggagagcttgctttctggataccggatgtctcttcgaaacccgcgacgtgg
agatgcacgggacatgtgagaacaaggagaacgaacattctcatggccgcgtgcagttca
gcgaagaagacaatccttgtgtgcaagactagtgaagggcaggaagtcactatttggaac
tcaacagagtctgagttcgccacagggctggaatatcgtcgggtgtacggctcttcggat
cccatcctcgacttagattggactgctacgccggatggtcagtcgatccttgccgtcgga
tatgcgcatcgagtagagctgctctgccaacaacgtatgacctacttcgatgatacccct
ggctggggcatatgctggaagatcgatttaactaataccattccacaccaaatcaatgat
tcgatatggctcaagggcggctcgctgctggtcggtactggccatctgatgtctctatat
ggccaagtgccttcgatagctgacagccgtgaggaaagcttattcgagcacgtggcacgc
cacaatggacctttggacgagtatcatccacagatgatactgcaatgtttattgtgggag
aaggtggaactggtcaagaatatcgttatcaatctagctaagaacatcaggtggacaagg
gatacttacgaatggaaaacattacctaccgaggagttcctgaagaaggacgagactgca
agagcaatccatgcctcatctaaacctcgttactccagcctcttcactgtgcctgagaca
gcggacgagtccgatgcagagcaattctcttctgaccttgttcagaagctcgttgagcgg
ctggaagaggaaccgctaccgcatcttacgccaaatgagaaagatgccctcatagtactc
atgcaagccacattggagattgaacgacaacgccgcgcgttagattccaatggtttgcgc
tatttgatctcaatgcgcgtcttttacatcttcaatcggcgtctgtcgtctccaagttct
cccagttcaaatgggacactgtctggccggacgcacaaacgcgaaaggctgcgataccga
gacatgctgtgggctttccatagtgaaagtcaagggctcctactgtcaacctccgtagcg
tcgtgcgaaggtcagaaaatgcgctggtcagacgcaagagctttgggcgtgtatatctgg
ctacggtcaatagaaacaatgaaagctcacatggaagtgatagcgcgcaatcaatacatg
gctggcgacaaccgtgacccgacggaatgtagtctattctactttgcactcggcaaggcc
aagctggtccacgggctttggcgacaggcatcatggcataaggaacagaaccctatgctc
aagttcctcaataatgacttctcgcagcctcgctggagaacggccgcgttgaagaacgca
ttcgctcttctgagcaaacggagatttgaatacgccgcagcattcttcctactcggcgac
agtctgaaggatgccgtcaacgtgtgcttgaggaatcttcaggattttcaactggctatc
gcacttgccagggtagtcgaaggtagcgacaacggtccggtcctcagaagcattctcgag
tctgctgtcattccaacagcgttcagagaaggcaatcgctggctggcaagttgggcgttc
tggatgttacaccgcagagatcttgcggttcggatacttataaccccactaagcgatatg
gctaacgtatggacgggtatcactgaaatcggcgagtcgcactacgacgacccaagcctc
gcactgttgttctctcagctcaagttgaagaccttgcagacggcgaagggcactagcgaa
gtgtctggacgtacggaattcaactttgtcttacagattgcccgcgtattctgcaggatg
ggatgccacgcactggcacttgatctcgtgagaacgtggtcgtttgagaggccgtcaaca
gtggtgcacgattcgccagtcatccgtcatccaccaagtcccatcatagcacgcttcgct
ctagaaccgggtatgcgtcggcagtcttccatcatgatcgacatggacatccccaccgaa
ccgcctactcgctccgcttctcccatccgcggattgccaaatggcgccggaccgtctagc
gacgcggaagtcctcgaggaaagcaacggagacctggttgctagaaaggctggtatggga
cgactgctgaagtctgcaaaacaggatgtccaagtaccagagttcgacatgaatgccttc
ttttaa
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