Phanerochaete carnosa: PHACADRAFT_141577
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Entry
PHACADRAFT_141577 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
pco
Phanerochaete carnosa
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pco03019
]
PHACADRAFT_141577
03036 Chromosome and associated proteins [BR:
pco03036
]
PHACADRAFT_141577
Messenger RNA biogenesis [BR:
pco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
PHACADRAFT_141577
Chromosome and associated proteins [BR:
pco03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
PHACADRAFT_141577
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
PHACADRAFT_141577
microRNA pathway
RISC loading complex
PHACADRAFT_141577
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
ArgoL1
PAZ
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
18908522
NCBI-ProteinID:
XP_007394544
JGI:
Phaca1_141577
UniProt:
K5X1Q0
LinkDB
All DBs
Position
Unknown
AA seq
873 aa
AA seq
DB search
MRLQDTDLPVRPGFGSAGTPIKLRTNFFPVKVPKGPLHEYDVKITPEIAVKRVKRRIFQL
AEQTPAWEGAGLKGNVTHDHSAKLIAAKALPQPLEIVVPFTEDEEAEISTKPKGGKKDGK
SEKKEYTLTIKFTQELETQSLVSYLNGQPQYRGYDILPIIAALNLILAAHPNRSSAGGVM
VGRNKFFHPSPQEPPVPIGGGLEAWRGFYSSVRPAHKTLMVNVNVCTTAFYTPGNLADGM
YAFAQSGAGTRVGAFVRGVRVKTTHLGRTKTIKGVHQSNARTFSFQAEGMGTVTVEQYFK
RKYGITLNYPELQLIDIGGPGGKPNLLPPEVCEILPNQPYRGKLLDDHTAEMIKVACRFP
NVNAAAIVNRGIHELGYVGKNAILQAFDTAVGNELAVVPGRILPLPVVKYSKGNTNIDER
ASWNLRDVRFSIPGRFDEWAVLLIQDNGRDEFQGENDPALDKIIADFSRMCAKSGVNFSK
KNPQIHSVQLDRKSNSDPLRKSSVTKIRDKLRQMRPKPDFLLVMLSNSDRHIYSGLKHQS
DVFADMTTICVQVAKIRKERGQPQYFANVALKLNMKTGGVNHTLEAKHTTWLRQRPTMMV
GIDVTHPGFGTVKSTPSIAAVVASIDQHFGQFPCSLRMQESKKEMVSDLADMMVERLQAF
QQTNKGTLPDRIIVYRDGVSEGQFNIVIKDEMPEIKKAFRKFDRQQSYMPKLTIVICGKR
HHTRFFPTDAQSAAGDGNPRPGTVVDRGVTAVYEFDFFLQAHGGLQGTTRPTHYYVVHDE
IGFAADQLQTLTNDVSFLFARATKAVSLVSPAYYADLACERGRCYLHPLLQGITERRVRT
GQTEVSEEDVWSEAKELWGSGPGANVRKTMFYL
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgcgactacaagacactgaccttcctgtgcgccctggctttggctcggcagggacacct
atcaagctacgcacgaacttcttccccgtcaaggtccccaagggcccgcttcatgaatat
gacgttaagattactccagagatagccgtcaagcgagtcaagcggcgtatattccagctc
gccgagcagactccagcgtgggagggcgccggcttgaagggaaacgttactcatgaccac
tctgcgaaactcattgcggcaaaagcgctgcctcaacctctcgagatcgtcgtacctttc
acggaggacgaagaggcggagatctccacgaagcccaaaggcgggaagaaggacgggaag
tcagagaaaaaggaatacacgctgactatcaaatttactcaagaactggagactcagagt
ctcgtcagctacctcaatgggcaaccccaataccgtggctacgatatcttgccgatcatt
gcggctctcaacctcatcctcgctgcccatccaaacaggtcgtccgccggtggtgtcatg
gtagggaggaacaaattcttccatccatcacctcaggaacctcctgtccctatcggaggt
ggtctcgaagcttggcgtggcttctactcctccgtccgcccggcacacaaaaccctcatg
gtgaacgtgaacgtttgcacaactgcattttacacaccggggaatctcgccgatgggatg
tacgccttcgcccaaagtggtgctggtacgcgagtcggggctttcgtgagaggtgtgcgc
gtgaagacgacgcaccttggtcggacaaagaccatcaagggtgttcaccagagtaacgct
cgaaccttcagcttccaagcggagggtatgggcaccgtcacggtcgaacaatatttcaaa
aggaaatacggtattacgctaaattatcctgagctgcagctcatagatatcggtggcccc
ggcggaaaacccaacctgcttccccccgaagtatgcgagattctcccgaatcagccatat
cgcgggaagctgctcgatgatcacacggcggagatgatcaaggttgcctgtcggttcccc
aacgtcaacgctgccgctatcgtcaatcgtggcattcacgaattgggctacgtcggcaag
aatgcaatcctgcaagcattcgacactgctgtaggcaacgaactggcggtggtccctggg
cgcattcttcctctaccggttgtcaagtactcgaaaggcaatacaaacattgacgagagg
gctagctggaacctgcgcgacgtccggttctccatccccggccggtttgacgagtgggct
gttctccttattcaagacaacgggagagacgagttccagggcgagaatgacccagcgttg
gataaaatcatcgctgacttttcgagaatgtgcgccaagtcgggtgtgaacttttcgaag
aagaatccgcaaatccacagcgtgcagctcgaccgcaaaagcaactctgaccctctccgg
aaatcgtctgtcacaaagatccgggacaagcttcgtcaaatgcgccccaagcccgatttc
ctacttgtcatgctctcgaacagcgaccggcacatttattcgggcctcaaacaccagtca
gacgtcttcgcggacatgacgacgatatgcgtgcaggtggccaagatccgcaaggagcgc
gggcagccgcagtacttcgcgaacgttgcgctcaagttgaatatgaagactggcggcgtg
aaccatacgctggaggcgaagcacacgacgtggctaaggcagcggcccacgatgatggtt
ggcattgacgttacgcatccaggttttggcaccgtcaagagcacgccatccatcgcggcg
gttgttgcgagcattgatcagcatttcggccaatttccttgtagtctgcgcatgcaggag
tcgaagaaggagatggtatccgacctagccgatatgatggttgaacgtctccaagccttc
cagcagacaaacaaaggcacgctcccagacaggatcatcgtgtatcgcgacggcgtctca
gaaggccaatttaacatcgtcattaaagacgagatgcctgagatcaagaaagcgtttaga
aagtttgataggcagcagtcatacatgcccaagctgacgatcgtcatatgcggcaagcgt
caccacacgcgtttcttcccgacagacgcacagagcgccgctggcgatggcaaccctaga
cctggcaccgttgtcgaccgcggcgtgactgccgtctacgagttcgacttcttcctgcag
gcgcacggcggactccaaggcacgacccggccgacgcactactacgtcgtgcatgacgag
atcgggttcgcggcggaccagctacagacgctcacgaacgacgtctcgttcctcttcgcg
cgcgcgaccaaggccgtctcgctcgtctcgcccgcgtactacgccgaccttgcgtgcgag
cgcggccgctgctacctccacccgctcctccagggcatcaccgagcgacgggtgcggaca
gggcagacggaggtttctgaggaagacgtatggagtgaagcgaaggagctctggggttct
ggtcccggggcgaatgtccggaagacgatgttctacctctga
DBGET
integrated database retrieval system
