Phanerochaete carnosa: PHACADRAFT_141667
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Entry
PHACADRAFT_141667 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K14793
ribosomal RNA-processing protein 9
Organism
pco
Phanerochaete carnosa
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pco03009
]
PHACADRAFT_141667
Ribosome biogenesis [BR:
pco03009
]
Eukaryotic type
90S particles
Other 90S particles
PHACADRAFT_141667
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
NBCH_WD40
WD40_like
Kelch_2
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
18908525
NCBI-ProteinID:
XP_007394588
JGI:
Phaca1_141667
UniProt:
K5VYU5
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MPDAFFQSNKSRKRKRSTIGGDGPSTFKKLARSGAPGKSQGRGGKKVGAAHPKRSVRDEE
LSDETRDEEDGTDIDDMDLRAPDVDPNAYESAEEDEDETPAEKRLRLAKLYLEGVKEGLG
LAEGEFDAAEIDRELISARLKQDVLEHAGKVHLFVADTYDLSGPPIFRTRGHRFSATSAV
ASEDARWLYTSGKDGCIIKWDLSTGKKIHQFFKVRPAKDSGKGKGKAKAEPVGELRGHTD
EIWALALSPDGKLLASGGKDRRIGIWNAETNEWVKGFGGHRDSISALSFRKAPTTTNTPT
QLYSGSFDRTLKIHDLSVMGYVETLFGHQAPVLNIDSLMKETAVSVGGRDKTVRFWKVPE
ESQLVFRGGSKSGWEDALEGGNLEDGMDDDNGKKKKQSRTSEKFIEGSIECCAMIDETTF
VSGGDSGSISLWTTQKKKPIFIQPLAHGVDESQVETEDMDIVRKPRWVTALGCLRYSDMF
ASGSWDGEIRVWKLDPKLRSFSLVGSIHALGVINTLQFISVPRSEIANYSWARHGDTETV
PNAREGVPSRVPRMSEPKSVLLVAGIGQEMRLGRWVQKKGEGVLNGALVVALNPRTSTSS
S
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgccagacgcattcttccagagtaacaagagcaggaagcgcaaacgttccaccataggc
ggcgatggtccgtctaccttcaaaaaactggcgcgctcgggcgcgcctggcaagtctcaa
ggccgaggaggcaagaaggtcggtgcggcgcatccaaagcgcagtgtcagagacgaggaa
ctctcggacgagacacgcgatgaggaggacggcacagacatcgacgacatggatctgcgg
gcgcccgacgtcgatccaaatgcgtacgaaagcgcagaggaagacgaggacgagactccg
gccgagaaacggctgaggttggctaagctctacctcgagggtgtcaaagagggcctcgga
cttgcggagggcgaatttgacgcggccgagatcgacagggagctcatttcggcgaggctg
aaacaagacgtgctcgaacatgcgggcaaagtccatctgtttgtcgcggacacatatgac
ctgtctggccctccgatcttccgtactcgggggcaccggttctctgcaacttctgccgtt
gcatctgaggacgcacggtggctctatacctccggcaaggacggctgcattatcaaatgg
gacttgagcactggcaagaaaattcaccagttcttcaaggtccgacctgcgaaggacagt
ggaaaagggaaagggaaagcgaaggcggaaccagtgggcgagctgcggggtcatacagac
gagatctgggcgttggctctgagtccggacggcaagttattagcgagtggtggaaaggac
aggcgaataggtatttggaatgccgagacaaatgagtgggtgaagggctttgggggacac
agagacagtatatcggctctgtccttccgcaaagcacccacaaccacgaacacacccaca
cagttatacagcgggtcgtttgaccggacacttaaaattcatgacctttctgttatgggc
tacgttgaaacgctattcggccaccaagcaccggttctcaacattgactcgctcatgaag
gaaacagctgttagtgtgggtgggcgagacaagacggtgcgattttggaaggtgccggag
gaaagtcaactagtgttccgcggtggaagcaagagcggctgggaggatgcgttagaaggt
ggtaatttggaggacgggatggatgacgacaatgggaagaagaagaagcagagcaggaca
tcggagaagttcatagagggcagcatagagtgctgtgctatgattgatgagacgaccttc
gtcagtggtggcgacagcggctctatcagcttatggacgacgcaaaagaagaaaccgatc
ttcatacaaccgcttgcgcacggtgtggacgagtcgcaggtggagacggaagacatggac
attgtccgtaagccacgctgggtcacagccctcggatgtctccgctattccgatatgttc
gcgtcaggttcatgggacggcgagatccgggtatggaagctcgacccaaagctcagatcc
ttctccctggttggcagcatccacgcacttggtgttatcaacacactacagtttatctct
gtaccgcggagcgagatcgcgaattatagctgggctaggcacggagacacggagacggta
ccgaacgcccgagagggtgtaccctcgcgtgtgccacgaatgtcagagccgaagtcggta
ctgctcgttgccggcattggccaggaaatgcgcttgggccggtgggtacagaagaaaggc
gagggcgtcctgaatggtgcgcttgtcgttgcgctaaatccacggacatccacctcttca
tcataa
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