Phanerochaete carnosa: PHACADRAFT_148496
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Entry
PHACADRAFT_148496 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
pco
Phanerochaete carnosa
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pco03016
]
PHACADRAFT_148496
Enzymes [BR:
pco01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
PHACADRAFT_148496
Transfer RNA biogenesis [BR:
pco03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PHACADRAFT_148496
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-GeneID:
18908757
NCBI-ProteinID:
XP_007398404
JGI:
Phaca1_148496
UniProt:
K5VQG8
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MPRDVREVDRHQDSAPEVILTDTGLRKVKPYWYNYTTMAKGRWLGREILEIISTEFRDRS
MEYYRYALESGVTTINGKVAKPDTIVENGDRIENVAHRHEPPVTSTPVRIVHHDAVRGFI
VIDKPGSIPVHAAGRYYKQSLVQILKTEMGFDNAYTVNRLDRLTSGLMILPLSAQLAHTM
AKEFAAGSVKKEYIARCKGEFPEGETVCEEPLLTVDRQMGLNVVHPEGKSAKTIFTRLHY
DAETDSSVLHCRPVTGRSHQIRVHLQYLGYPIANDPIYSDQTIWGENLGKGGVDVTPSDT
RAAPVAPPEFLFAEGENPESLSDKRARSQNNAPENIPKNKPLPRETGHDIGMGSPVPLSA
EAVEIITRLRNQKDKDEDWGRWRDVVFRVKGRLRPKCVPAPPPLPPQNRRRRGGPISLYP
PENEKVEIEKHPDSEQLKYCPECYLPLHPDPKPERLYIFLHALRYTTSLGCFETETPAWA
AKGFKWDRD
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgagatgtccgggaggtagacaggcaccaagactcggctcccgaggtcatcctg
accgacacaggcttgcgcaaagttaagccgtattggtacaactacaccactatggcgaag
ggtcgctggctaggacgggaaattttggagattatctctaccgagtttagggaccgcagc
atggagtactacagatatgcgctcgagtccggcgtgactactatcaatgggaaagtagca
aaaccagatactattgtggagaatggagatcgcatagaaaatgtcgctcaccgacacgaa
ccgcctgtgacctcgactcctgtgcgtatagtacaccacgacgcggtgcgaggattcatc
gtcatagacaagcctgggagcataccagtgcatgcggctggacgttattacaagcagtcg
ctcgtgcaaattctcaagacagagatgggcttcgataacgcgtacactgtcaaccgtcta
gaccgtctcacgtctggacttatgattctgccgttatctgcacaactcgcccatacgatg
gctaaagaattcgccgcaggatctgttaagaaggagtacattgcacgctgcaagggcgaa
tttcccgagggcgaaactgtttgtgaagaaccacttctgacggtggatcgtcaaatgggt
ctcaatgttgtgcatccggaagggaaatcagcgaaaaccatctttactcgcctacactac
gatgcagagacagatagcagtgtcttgcattgtcgaccggttactggaagatcccatcaa
attcgcgtacacctccagtaccttggctatcccatcgccaacgaccctatttatagcgat
caaacaatatggggcgaaaaccttggcaaagggggtgttgatgtcacgccgagcgacacc
cgagctgcacccgtggcaccccccgagttcctgtttgctgaaggcgagaaccccgagtcg
ctatccgacaagcgggctcgatcacaaaataacgcacctgagaacataccaaagaacaaa
ccgttgccgcgagaaacggggcacgacatcggcatgggttcccccgtcccgctgtctgct
gaagctgttgagattattacaagactgcgaaaccaaaaggacaaggatgaggactggggc
cgttggcgtgatgtcgtcttccgtgtcaagggacggctgcgtccgaagtgcgtgcctgca
ccgccgcccctgccaccgcagaacagacgccgcagaggtgggcctatctctttgtacccg
cccgagaacgagaaggtggagatcgagaaacatccggactcggagcagctcaagtactgc
cccgagtgctacctgccgctgcacccagacccgaagccggagcggctgtacatcttccta
catgcgctgcggtacacgacgagcctgggctgcttcgagacggagacgccggcgtgggcg
gcgaaggggttcaagtgggaccgtgattga
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integrated database retrieval system
