Phanerochaete carnosa: PHACADRAFT_152803
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Entry
PHACADRAFT_152803 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K10756
replication factor C subunit 3/5
Organism
pco
Phanerochaete carnosa
Pathway
pco03030
DNA replication
pco03410
Base excision repair
pco03420
Nucleotide excision repair
pco03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PHACADRAFT_152803
03410 Base excision repair
PHACADRAFT_152803
03420 Nucleotide excision repair
PHACADRAFT_152803
03430 Mismatch repair
PHACADRAFT_152803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pco03032
]
PHACADRAFT_152803
03036 Chromosome and associated proteins [BR:
pco03036
]
PHACADRAFT_152803
03400 DNA repair and recombination proteins [BR:
pco03400
]
PHACADRAFT_152803
DNA replication proteins [BR:
pco03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PHACADRAFT_152803
DNA Replication Termination Factors
ELG1-RFC complex
PHACADRAFT_152803
Chromosome and associated proteins [BR:
pco03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
PHACADRAFT_152803
DNA repair and recombination proteins [BR:
pco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PHACADRAFT_152803
Check point factors
HRAD17(Rad24)-RFC complex
PHACADRAFT_152803
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_30
AAA_14
AAA_11
DUF815
AAA_assoc_2
RuvB_N
AAA_19
AAA_22
ResIII
RCF1-5-like_lid
AAA_24
AAA_16
DEAD
AAA_3
AAA_5
ATPase_2
AAA_7
Viral_helicase1
AAA_28
bpMoxR
nSTAND3
Methyltransf_31
AAA_33
Mg_chelatase
SLFN-g3_helicase
MCM
Motif
Other DBs
NCBI-GeneID:
18908924
NCBI-ProteinID:
XP_007400912
JGI:
Phaca1_152803
UniProt:
K5VHD2
LinkDB
All DBs
Position
Unknown
AA seq
358 aa
AA seq
DB search
MNSDHEMETEEQTPVQWPIGKGKGKEKAVEQANGHDPENLPWVEKYRPVTLDDVVSHKDI
TSTIEKFIEKNRLPHLLFYGPPGTGKTSTILAVARRIYGKDYRKQILELNASDDRGIDVV
REQIKNFAETRTLFSKGYKLIILDEADMMTTAAQAALRRVIEQYTKNVRFCIICNYVNKI
IPAVQSRCTRFRFSPLPVPEVERRINGVIETEGVKITGDGRKALLKLSKGDMRRALNVLQ
ACHAAYDETGEREVYHCTGTPDPADIANIVNSMFSDEFTTSYKMISSLKTDRGLALQDLL
NGAYEYVDELELKPHARIYLLDYFATAEYRLSAGASEKIQLTALLGAFKNAVELSQIA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcgaccatgagatggaaaccgaggagcagacgccggtgcagtggcccattggc
aagggaaagggcaaggagaaggcggtagaacaggcgaacggacatgacccagagaactta
ccgtgggtcgagaaatatagacctgtcacgctggacgatgttgtatctcacaaagacatt
acaagcacaatcgaaaagttcattgagaaaaacaggttgcctcacttgctattctatgga
ccgcccggtacgggaaagacatcgaccatcttggctgttgcacggcggatatacgggaag
gactaccgcaaacagattctcgagctcaacgcctctgatgatcgtggcattgatgtcgtt
cgtgagcaaatcaagaattttgctgaaacacggacgctcttttcaaaaggctacaagctc
atcatcctagatgaggctgacatgatgactactgcagcacaggccgccctccggcgggtc
atagaacaatacacgaagaatgttcgattttgcattatctgcaactacgtgaacaagatc
atacccgccgtccagagccggtgcacgcgcttccgtttctcgcctctgcctgtccctgaa
gtagagcgaaggatcaatggggtcattgagaccgaaggtgtgaaaatcaccggtgatgga
cggaaggcgctgctgaaactctcgaagggcgatatgcgaagagcactgaacgttcttcaa
gcatgtcatgcggcatacgacgaaacaggcgaacgagaggtgtatcattgcactggtaca
cctgatccggctgacatcgccaacatcgtcaattcgatgttctccgacgaattcactacg
tcatacaagatgatctcctctctgaagacagatcgtggcctggcactacaggatctactc
aacggagcatacgagtacgtcgacgaactagaattgaagccacacgctaggatctacctt
ctcgactactttgccactgccgagtatcgtttgtctgccggtgcgagcgagaagatccaa
ctgacggctctgctcggcgctttcaagaacgccgtcgagctttctcagatagcatag
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