Phanerochaete carnosa: PHACADRAFT_153289
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Entry
PHACADRAFT_153289 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pco
Phanerochaete carnosa
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pco03016
]
PHACADRAFT_153289
Enzymes [BR:
pco01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
PHACADRAFT_153289
Transfer RNA biogenesis [BR:
pco03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PHACADRAFT_153289
Prokaryotic type
PHACADRAFT_153289
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
18908938
NCBI-ProteinID:
XP_007401209
JGI:
Phaca1_153289
UniProt:
K5VFR3
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MKTEPQPSASAPSTDLKRPNTDAPTEAEPAQKKLKRETERQESPDDAGTCEPVAEGSAAD
TPKQGGEKKGRQEQSRRAAHRAWEKEKKQGIRRGGTRTESSEARGNDNEPKEPRLPKRQT
ALLIGFCGSGYNGMQLQRNHENIKTIEGTLFDALVRVGAVSKDNADNPAKVNFNRAARTD
AGVHAAGNLVSMKMITSIPGVDNLIARINEELPQEIRLWDTVRVQNAFNARTTCNARKYT
YFFPSYLLIPPKPGSGLHKTVFEQNSASSPLLDFWQGVPAESSPNDDLARKRTWRAPKEV
VEMLRETAKKFEGSHKFHNFTVGQEYKDPTSQRIMKKIEVADPVVYGDTEWISVLLHGQS
FMLHQRKMISLLVLACRTGTPPTVVEELYGPRSAFIPKMPALGLLLEYPIFDSYNKKIEG
TNASLKLDDPEYRLPIDFEIHREKIEKFKQGFIYSRMHSIESQSGLFDAWIRSLDKYQGN
DLLYLTSKGVLPDSAVIKRGERRSDPFREKKRFDATVFPEGRVSKIEIEEAEEADEDEEE
EVLPANKKEREELEG
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaagacagagcctcagccatctgcttctgcgccgagcacagacctcaagcgaccaaac
acggacgcgcccacggaggcagagcccgcacagaagaagctgaagcgggagacggagcgg
caagagagcccggacgatgccggtacatgtgagcctgtcgcggagggttctgcggcagat
acgcccaagcaaggcggagagaagaagggcaggcaggagcagtcgcgtcgggcagcgcac
agggcatgggagaaggagaagaaacaggggatccgacgaggaggaacgcgtacggaaagt
tcagaggccaggggtaacgacaacgaacccaaggagcccaggctgcccaagcggcagacc
gcgctgctcattgggttctgcgggtctgggtataatggtatgcaactacagcgtaatcat
gaaaatattaagacgattgagggcacgctgttcgatgcgctcgtcagagtcggtgcggtg
tcgaaggacaatgcggataatcccgcaaaggtcaacttcaaccgcgcagcgcgaacagat
gcaggcgtgcacgctgctggaaatctggtgtccatgaagatgatcacatccatcccagga
gtggacaatttgattgcacgtataaatgaggagttgcctcaggagattcgtctttgggat
accgtacgtgtgcaaaacgctttcaacgcgagaacaacgtgcaacgcacgaaagtatacc
tatttcttcccctcatatctcctcatacccccaaaacccggcagcggcctccacaagacc
gtgttcgaacaaaacagcgcttcttctcccttgctcgacttttggcaaggcgtaccggcc
gagtcgagcccgaatgatgacctcgcgcggaagcgaacctggcgcgcgccgaaggaagtg
gtggagatgctgcgtgagacggccaagaagttcgagggctcgcacaagttccacaacttc
acagtcggacaagagtacaaggaccccacctcgcagcggatcatgaagaagatcgaggtt
gcagacccagttgtgtacggagataccgagtggataagtgtgcttctgcacgggcagagc
ttcatgcttcaccaacgtaaaatgatcagtttgcttgtcctggcctgccgaacagggacg
ccgcctactgttgtcgaggagctgtacggtccccggtctgcgtttattcctaagatgcct
gcgcttggcctcttgctagagtatcctatattcgacagctataacaaaaagatcgaaggc
acgaacgccagcttaaaacttgatgacccagagtatcgcctgccgatcgatttcgagata
cacagagagaagatagaaaaattcaagcaaggcttcatctattccaggatgcacagcatc
gagagccagagtggcctctttgacgcgtggatccggtctctggacaagtatcaaggaaac
gacttgctctacctgacttcaaaaggcgtccttcctgattcggccgtcatcaaaaggggc
gagcgcaggtcggatccgttccgcgaaaagaagcgattcgacgcaacggtctttcctgag
ggccgagtttccaagatcgagattgaagaagcagaggaagcggacgaggacgaggaagaa
gaggtgctgccggctaacaagaaggaacgtgaggagttggaggggtaa
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