Phanerochaete carnosa: PHACADRAFT_157248
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Entry
PHACADRAFT_157248 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K10754
replication factor C subunit 1
Organism
pco
Phanerochaete carnosa
Pathway
pco03030
DNA replication
pco03410
Base excision repair
pco03420
Nucleotide excision repair
pco03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PHACADRAFT_157248
03410 Base excision repair
PHACADRAFT_157248
03420 Nucleotide excision repair
PHACADRAFT_157248
03430 Mismatch repair
PHACADRAFT_157248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pco03032
]
PHACADRAFT_157248
03400 DNA repair and recombination proteins [BR:
pco03400
]
PHACADRAFT_157248
DNA replication proteins [BR:
pco03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PHACADRAFT_157248
DNA repair and recombination proteins [BR:
pco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PHACADRAFT_157248
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_30
nSTAND3
AAA_22
AAA_19
AAA_5
AAA_11
AAA_16
RuvB_N
AAA_18
AAA_33
NTPase_1
AAA_14
Sigma54_activat
AAA_24
cpSF2-GREB1
AAA_assoc_2
BRCT_2
AAA_28
Motif
Other DBs
NCBI-GeneID:
18909069
NCBI-ProteinID:
XP_007391556
JGI:
Phaca1_157248
UniProt:
K5X7Y2
LinkDB
All DBs
Position
Unknown
AA seq
677 aa
AA seq
DB search
MAAGPSAPGSKPVPAAKDSNCLAGLSFVFTGELSAFSREEATDLAKRFGGRVVSQPSSRT
DYVVLGADAGPSKLAAIKKNNLKTLDEDGFLNLIATRVPDYTDDKLKKKIEKEQDAIRAA
ANELERREKEIEKKVKGKEKGKDQISNTVPLGSQLWVDRYSPHTLKEVCGNKGQIEKLQQ
WLNDWPSSLKSGFKKPGKNAMNTSRAVLITGPPGIGKTTAAHLCAKLAGFTPIELNASDA
RSKRLVENSTNVSNTSLDGWMHGTEATNAAGVKITDKSCLIMDEVDGMSAGDRGGVVALV
ALIRKTKIPIICIANDRGAQKLKPLIANAFNLPFRRPEAAAIRSRLLTIAFKEKMKVPAN
VIDQLVMGAQSDIRQVLNMLSTWKLSNNAIDFDQGKDLSKMNEKYTVLTPFDVTYKMLGP
YMFSATARETLGDKMELYFHDPSFVPLFMQENYLKTQPSRIKNDAGPEKTLKHLELMDKA
ASSLSDGDLVDALIHGPEQHWSLMPLHAVCSTIRPASFLYGSGGGYGGQNPMSFPAWLGQ
NSKQSKLNRELMDMQARMRLKVSSDRHELRQSYIPALFPYVVKPLMDEGVSAVGTVITRM
DDYFLNRDDWDTLVELGLDEYKDEVVLKKITPATKTGLTRKYNAADHPIAFHKATDLGKV
PKKLAAQGPAPDLEEAP
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgggcccttcagcaccgggttcgaagcctgtaccagcggcgaaggactcgaac
tgccttgcagggctatcgttcgtgttcacgggcgagctgagtgcgttctcccgtgaggaa
gctactgaccttgcgaagcggtttggcgggcgcgttgtcagccagccgtcgtcccgaacc
gactatgtcgtcctcggcgccgacgcggggccgtccaaacttgcagcgatcaaaaagaac
aacttgaagactcttgacgaggatgggtttctcaatctcatcgcgactcgtgtcccagat
tatactgacgacaagctgaagaagaagatcgagaaggagcaggatgcgattcgtgcggcc
gcgaacgagctggagcgccgcgagaaagagatagaaaagaaagtgaagggcaaggagaag
ggcaaggaccagatcagtaatactgttcctctgggtagtcagctgtgggtagaccgctat
tcgccacacacgctcaaagaggtttgcggcaacaaggggcagattgagaagctgcagcag
tggctgaatgactggccgtcgagtctcaagtccggattcaagaagccgggaaagaacgcg
atgaacacgtcgcgcgcggtactcatcacgggcccgccaggtatcggcaaaacgactgcg
gcgcacctgtgcgcgaagttggcaggattcacacccattgagctgaacgcgagtgacgcg
cggagcaaaaggctcgtggagaacagcacgaatgtctcgaatacgagcttggacgggtgg
atgcacgggactgaggcgacgaatgcagctggcgtgaagatcacggacaagagctgtctg
atcatggacgaggtcgacggcatgtcggcaggcgatcgcgggggtgtcgttgcgctcgtt
gcgctgatacgaaagaccaagattcctatcatctgtattgccaacgacaggggtgcgcaa
aaacttaagccgctcatcgcaaatgcgttcaacctgccattcaggaggcccgaggcggcg
gcgattcggtcgaggctgctcacaattgcattcaaggagaagatgaaagtcccagcgaat
gtgattgaccagctcgtgatgggtgcgcagtccgatatccggcaggtgcttaacatgctg
tcgacttggaagctttcgaacaacgctatagatttcgatcaaggaaaggacctatcgaag
atgaacgagaaatatacggtgctgacgccgttcgatgtcacgtacaagatgctgggcccg
tacatgtttagcgcgacagcgcgcgagacgctgggagataagatggagctctactttcac
gacccgtcatttgtgccgctgttcatgcaggaaaactacctgaagacgcagccatcgcgg
atcaagaacgacgcgggacccgagaagacgcttaaacaccttgaactcatggacaaggcg
gcatcgtcactctccgacggagacctggtcgatgcgctgatccatggtccagagcagcac
tggtcactgatgccgctacacgcagtatgctctacaatacgacctgcatctttcttgtac
ggctcaggtggtgggtatggaggacagaacccaatgagcttccctgcatggctgggacag
aactcgaagcagagcaagctgaacagggagcttatggacatgcaggcgcggatgcggctg
aaagtctcgtcggacaggcacgagctccgacagtcatacatacctgcactgttcccgtat
gtcgtcaagccactgatggacgagggtgtgagtgcggtgggcacggtgattacgcggatg
gacgactacttcctgaacagagatgactgggacacgcttgtcgagctcggattggatgaa
tacaaggacgaggtggtgctgaagaagatcacgccggcgacgaagacagggctgacgcgg
aagtacaatgccgcagatcacccgattgcgttccacaaggcaacggacctgggcaaagtg
ccaaagaagctcgcggcgcaaggtcctgcgccagatctggaagaggcgccatga
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integrated database retrieval system
