Phanerochaete carnosa: PHACADRAFT_160215
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Entry
PHACADRAFT_160215 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K14328
regulator of nonsense transcripts 3
Organism
pco
Phanerochaete carnosa
Pathway
pco03013
Nucleocytoplasmic transport
pco03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PHACADRAFT_160215
03015 mRNA surveillance pathway
PHACADRAFT_160215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pco03019
]
PHACADRAFT_160215
Messenger RNA biogenesis [BR:
pco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
PHACADRAFT_160215
mRNA cycle factors
P-body specific factors
PHACADRAFT_160215
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
18909156
NCBI-ProteinID:
XP_007394533
JGI:
Phaca1_160215
UniProt:
K5V2E2
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MATVESSKASSSKSKSKEPKETKEPKEKERKARSSKQSHAERLKTVVRRLPPNLPEDVFW
QSVQRWVSDETVIWKEYHQGKFKKRLNKENIPSRAYIAFKDEETLATFSREYDGHVFRDK
ADEDYISFLESLKEPASKPFDVDIIETLVASTQAPAQPTTTPLLEALKAEKSAQKDKEAI
LRAHAHYKEIAANPSKASKKEEAKQKAAAAKTEAASQKAAPQVKPAEGQPSKKAAKKAAK
AAAQAQAKDANPPAAAKKGKDKEKDKDKEKKLEKEKEPQPAPTILKNQAQRTSEPSEAGT
SKPPPTTPKAPRSQASASASAPANPPPPVPPLAPSAQTAGSEPLASTPAPAAASRQRTRP
VIGLASRQFEAALSGVVGGRPRREREKDKESGPSTPVSAVPGTSASEASSPKPKQQAAAA
GAPTILQRDPQPASGVGAKQGQSAAESESGAPQRDESAGRGKGRGRGRGRGRGGA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgttgaatccagcaaagcttcttcaagcaagagcaagagcaaggaaccaaaa
gagacgaaggagccaaaggagaaggaacgcaaggcgcgctcgtcgaagcagtcgcacgcc
gaacggctcaagaccgtcgtgcgcaggctgccaccgaacctcccagaggacgtcttctgg
cagagcgtgcagaggtgggtctcggacgagaccgtcatttggaaggagtaccaccagggc
aaattcaagaaacggctgaacaaggaaaacattccgtcgcgggcgtacattgcattcaag
gatgaggagacgcttgctactttcagtagggagtatgacggacatgtatttcgggataag
gctgacgaagattacatctcgtttttggagtcgctgaaggagccagcgtccaagcccttc
gacgtggatatcatcgaaacactagttgccagcacgcaggccccagcccagcccacaact
acgcccctacttgaagctctcaaagctgagaagtctgcgcagaaagacaaggaagcgatt
ctccgcgcacatgcacactacaaggagattgcggcgaacccctctaaagcgtccaagaaa
gaagaagccaagcagaaagcggccgcagccaaaactgaagctgcctctcagaaggcggcg
ccacaagtaaagcccgcagaaggccagcctagcaagaaagctgcgaagaaggccgctaaa
gctgccgcacaggcgcaagcgaaggatgccaacccgcccgcagcagcgaagaaggggaag
gataaagagaaggataaggacaaagaaaaaaaattagaaaaggagaaggaacctcagcct
gcacccacgatactgaagaatcaggcgcaacgcacgtccgagccgagcgaagcggggacg
tcgaagccaccaccgacgacgcccaaagcaccccgaagccaggcgtccgcgtccgcgtcc
gcacccgcgaatccgcctcctcctgtccccccgcttgcaccctccgcgcagactgcaggc
tcagagccactcgcctctaccccagcacccgctgcggcctcccgacagcgtacgcgacct
gtcattgggctcgcgtcccggcagttcgaggcagcgctgagcggcgtggtgggcggtcgg
ccgaggcgtgagcgcgagaaggacaaggagtcgggcccgtcgacgcctgtctctgccgtt
cccggcacgtcagcgtcagaggcgagctcgcccaagccgaagcagcaggcggcggctgca
ggcgctccgacgatattgcagcgagacccgcagccggcgtctggggttggtgctaaacaa
gggcagtcagcggcagagagcgagagtggtgcgcctcagagggacgagagcgctggtcgc
gggaagggaagaggaaggggcagagggcgtggccgaggaggtgcatga
DBGET
integrated database retrieval system