Phanerochaete carnosa: PHACADRAFT_161608
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Entry
PHACADRAFT_161608 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K12587
exosome complex component MTR3
Organism
pco
Phanerochaete carnosa
Pathway
pco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PHACADRAFT_161608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pco03019
]
PHACADRAFT_161608
Messenger RNA biogenesis [BR:
pco03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PHACADRAFT_161608
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
MycE_N
Motif
Other DBs
NCBI-GeneID:
18909200
NCBI-ProteinID:
XP_007395910
JGI:
Phaca1_161608
UniProt:
K5WYK0
LinkDB
All DBs
Position
Unknown
AA seq
263 aa
AA seq
DB search
MAQSNFDRRRINGPEESFPPVFADEETPVKLGVPRNGRTAKDIRPISNGRAVLKPGLINQ
ANGSAYIETEKAKIACAVYGPRQSRSTTYSEKGRLNVEVKFTPFSCQRRRAPMRDAEDRS
VAVQIHQALLSSVRLELLPKSTIDIFIIVIENDGIEGCVASGSVAASAALADAGIDMLGL
VVSCSACIISKEIWLDPTEEEAKQATGTLVYASMPALDTVTNIWQTGKMTVQGAFQCMEA
CRERCTDIHLVVAQTLLDNTPSS
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggctcagagtaacttcgaccgcaggagaatcaatggccccgaggagagttttcctcct
gtctttgcagatgaggagacacccgtgaagctaggtgtaccgcgcaatggccggacggcc
aaggatatcaggccaatctctaatggcagagcagtcttgaagcctggcttgattaatcaa
gcaaatggttcagcatacatcgagacagagaaggcaaagattgcatgtgcagtgtacggt
cccagacagtcgcggagcacgacctatagcgagaaggggcgactgaacgttgaggtaaaa
ttcacaccattttcatgccaaagaagaagagcccccatgcgtgatgccgaggaccgatct
gtagccgtgcaaatccaccaagcgctgctctcttctgtgagactagaactcctgccaaag
tctacgatagacatcttcataattgtcattgagaacgacggtattgaaggatgtgttgcg
tcagggtctgttgctgcaagtgctgctcttgcagatgctggaatcgacatgctggggctc
gttgtgtcatgctcagcttgcatcattagcaaggagatctggttagaccccactgaagaa
gaggcaaaacaggcaacgggcaccctggtatacgccagtatgccagcccttgatactgtc
acaaatatctggcaaacaggaaaaatgactgtgcaaggagctttccaatgtatggaggcg
tgccgggagcgatgtacagatattcaccttgtagtcgcacaaactctgctcgacaatacg
ccgagcagctga
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