Phanerochaete carnosa: PHACADRAFT_165707
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Entry
PHACADRAFT_165707 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
pco
Phanerochaete carnosa
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pco03019
]
PHACADRAFT_165707
03036 Chromosome and associated proteins [BR:
pco03036
]
PHACADRAFT_165707
Messenger RNA biogenesis [BR:
pco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
PHACADRAFT_165707
Chromosome and associated proteins [BR:
pco03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
PHACADRAFT_165707
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
PHACADRAFT_165707
microRNA pathway
RISC loading complex
PHACADRAFT_165707
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
18909320
NCBI-ProteinID:
XP_007400239
JGI:
Phaca1_165707
UniProt:
K5UMY8
LinkDB
All DBs
Position
Unknown
AA seq
874 aa
AA seq
DB search
MPLRPGFGTAGRPQNLRANFFALRLPANLQIYDYEVSITGDKDLRRARKARIFDLLESSP
ECAPFRDHIAHDNSARLVSAKELPQPLQVTIHFYEEGRSGPGDNAPVYTVEIKHKRTLNK
RDIDPHLEGRDRSFDTLPHISALNLIVQRHAAKNGIRVGGDDEQDEKKRQGKSKYFFPAE
ERFPLMLGLEACRGFYVSIRPNFKQLMVNINACMTAFYTSGNLAEAMLVFQQRTGGFPSE
FFEKVKVVTTHLGYPKKKAIFRIMSTTPRTTKFNHNKHGEISVEQYFKQEYKITLQHANS
LPVIDIGNKDKANFMPPELCEIPPGQPYRGLLPDQATAEMIKVACNPPAFNASLIVNQGF
DLLGLRGNNSTLISFGISVSSEMTVVPGRVLPPPKVTYRSGQPVVRDGGWNLVGVKFTQG
GDMSNWAVLLVNEGRRSEFQSPQDPRLQRFLQGFSNMCQTSGMIVGQGPPLIMQTERLPR
EDPGRRRGVELIRKALLAGLNPARKPSFVLVLLSTTDIYPGLKRLCDMQLGLATVCMQLE
KATREQRQDQYFANVALKVNIKLGGINHLLAPDSMRWLTTKKTMLVGIDVTHPSPTSLKG
TPSITAVVASVDDKFVHFPAGLALQRNRNINKDAEEMVEGLVKLLVDRLTLYKKKMNALP
ERILVYRDGVSEGQYKLSLEKELPQILEACKRLSTADRKTPYRPTISVIVCGKRHHARLN
ATQSDQATRNGNTLPGTVVDKGITDIYNHDFYLQAHSGLQGTVKSTHYIVIYDENGITAD
QIQTGTNNASYMYARATKAVSLVPPAYYADLACERGRQWLSMLMNATDNQTRSQVSSRGD
SDAATQARQRVYDKAVELWRNGPQDDIKDTMFYI
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgcgacctggcttcggcaccgcaggcagaccccagaacctaagggccaacttc
ttcgcgctacgccttcccgccaacttgcagatctacgactacgaagtgtccatcaccgga
gacaaggatctgcgcagggctcgcaaggcgcgtattttcgacctactcgagagtagtccg
gaatgcgcgcctttccgagaccatattgcgcacgacaacagcgcgcggcttgtgtcggcc
aaggagttgccccagccactgcaagtgactatccacttttacgaagaaggccggtcggga
ccaggcgacaacgcccccgtatataccgtcgagatcaaacacaagcgtaccctcaacaaa
cgcgacatcgacccacatctcgagggtcgagaccggagctttgataccttaccacacatt
tccgctctcaatctcattgttcaaagacatgctgccaagaacggtatccgcgtcggcggc
gacgacgagcaggatgagaagaagcgccaaggcaagagcaaatacttcttcccagccgag
gaacgcttcccgcttatgctcggtctcgaggcctgccgtggcttctatgtttccattcgt
cccaacttcaagcagctgatggtgaatatcaacgcctgcatgaccgcgttctatacctcc
ggaaatctcgcagaggccatgctcgttttccaacagcggaccggaggatttccctcggag
ttctttgagaaagtgaaggttgtgacgacgcacttggggtatccgaagaagaaagctatc
ttccgcattatgagtaccacgccgcgcactacaaagttcaaccacaataagcacggggag
atctcagtggagcagtatttcaagcaagagtacaagattacacttcagcatgcgaactcc
ttgccggttatcgatatagggaacaaggacaaggcgaacttcatgcctcctgagctgtgc
gagatccctcccgggcagccataccgaggcctgctccccgaccaggccacagcggaaatg
atcaaggtcgcctgtaacccaccggcattcaacgcgagccttatcgtcaaccagggcttt
gacttgctcggtttgcgaggcaacaacagcacgctgatcagctttggcattagcgtcagc
tccgagatgacggtcgtcccgggtcgcgtccttcccccgccgaaagtgacgtacaggtct
ggccagcctgttgtgcgcgatggcggatggaacctcgttggcgtcaagtttacccagggc
ggggacatgtcgaactgggcggtgctactcgtcaatgagggccgccgttccgagttccag
tcgccacaggatccacggctccagcgcttcctccaaggtttctccaacatgtgccagacg
agcgggatgatcgtcgggcagggcccgccactcatcatgcagaccgagcgcttgccacgt
gaagatccaggacgccgccgtggtgtagaactcattcgtaaggcgctcctggccggcctg
aatccggcgcgcaagccgagttttgtgctcgtgcttctctccaccacggacatctacccg
ggactgaagcggctgtgcgacatgcagcttggcctggcgacggtttgcatgcagctcgag
aaggctacgagggagcaaaggcaggaccagtactttgctaacgtcgcgctcaaggtcaat
atcaagcttggtggcatcaatcatctactcgcacccgacagcatgcggtggctaacaaca
aagaagactatgctggtcggcatcgacgtcacacatccgtcaccgaccagtctcaagggt
acgccgtctattactgccgtcgtagcgagtgtggacgacaagttcgtacactttccggct
gggcttgcgcttcagcgaaaccgaaacatcaacaaggatgctgaagaaatggtagagggt
cttgttaagctgctcgtggaccgcctcacgctgtataaaaagaagatgaatgcattacca
gagcgcatactcgtgtaccgtgacggcgtctccgaaggccaatacaaactttcgctcgag
aaggaactgcctcagatcctcgaagcgtgtaagaggttgagcaccgcagaccgcaagacc
ccttaccgcccgacgatctctgtcatcgtctgcggtaagcgacatcacgcccgcttaaat
gctacgcaatcggaccaggctacaaggaacggcaacacacttcctggcaccgtggtggac
aaaggtatcacggacatctacaaccacgacttttacctccaggcacacagcggcctgcag
ggtaccgttaagtccactcactatattgtcatctacgacgagaacggcatcaccgcagat
caaatccagaccgggacgaacaacgcgtcgtacatgtacgcgcgtgcaactaaggccgtg
agcctggtgccgccggcgtactacgcggacctcgcatgcgagcgcggacgccagtggttg
agcatgctcatgaacgccacagacaatcagacgcgttctcaggtgagctcacgcggagat
tcggacgcagcgacgcaggcgcgccagcgcgtgtacgacaaggcagtcgagctgtggagg
aatggcccccaggatgatatcaaggacacgatgttctatatctag
DBGET
integrated database retrieval system
