KEGG   Phanerochaete carnosa: PHACADRAFT_166518
Entry
PHACADRAFT_166518 CDS       T03128                                 
Name
(RefSeq) hypothetical protein
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
pco  Phanerochaete carnosa
Brite
KEGG Orthology (KO) [BR:pco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pco03009]
    PHACADRAFT_166518
Ribosome biogenesis [BR:pco03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    PHACADRAFT_166518
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40 WD40_WDHD1_1st EIF3I WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_HPS5 ANAPC4_WD40 KNTC1_N WDR54 Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_VPS8 WD40_RFWD3 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_DCAF12 CFAP43_N Beta-prop_LRRK2 Beta-prop_WDR35_2nd DUF1192
Other DBs
NCBI-GeneID: 18909348
NCBI-ProteinID: XP_007401137
JGI: Phaca1_166518
UniProt: K5VTQ2
LinkDB
Position
Unknown
AA seq 501 aa
MQLQELVLCATTPSLSNPGPGSIALHDIQTGATLASFKQTSAGPHCTAVAHTRDGQGGFM
LAAQPDKSIMNVYNFQKDQLALKIVLPEKLSCIAVDPRGEFCAAGTSQGRLYIWEIASGI
MYNAWDAHYRQVGVLRFTQDSAALLSGSEDSAVNVWSVSRLLDDSTQNELPAPYTTLSDH
TLPITDVVVGAGAFPRCRVLTASVDHSVKVWDLESKSLLTTFHFPRPVSTLAWDSTERLF
FSASPDGFIHQVNLFRQRDDKLSRTMEAVGGAGSTDVIRITDEDQQAARKRLIAVDQPVM
SMTISLTSSLLLVGTASGLVHSYDIASHQLLRTISTHKGLSIAHLQTMLKPPDLVGHVSL
SLSAGNPADSRDTIPVRTVAPFQRMRDPKMREAHEVAVMLPPSLTWVLQKPVPAFFDYPV
DELLRDHASFVPTSGVQPSGVSLQTRVSELESEVVRLREQLGRAKSINDTMWETVVQRVV
AESREKAQEGEEMDRQKRARV
NT seq 1506 nt   +upstreamnt  +downstreamnt
atgcagctgcaggagcttgtactgtgtgcgacaacgccatcgctgtccaacccaggtcca
gggtccatcgcgcttcacgacatccagaccggagcgacgcttgcttcatttaagcagacc
tctgcgggaccacactgcactgcggtagcgcacacgcgcgatggacagggcggcttcatg
ctggctgcacagccagacaagtcgataatgaacgtgtacaacttccaaaaggaccagctc
gcactaaaaattgtactgccagagaagctttcatgcatcgctgtggacccaagaggagag
ttttgcgctgctggaacttctcagggtcgtctttatatctgggagatagcgtcgggcata
atgtacaacgcctgggacgctcattaccgtcaagtcggcgtcttacgctttacccaggat
agcgcagcactgctctcaggaagcgaagactcggctgtgaacgtctggtccgtctcgaga
ttgctcgatgactctacgcaaaacgaacttcctgctccctataccacactctccgaccac
acgctccccattactgacgtcgtggtgggagctggtgcatttccgaggtgccgagtcctt
acagcatctgtggaccactccgtaaaggtgtgggatctcgaatcgaaatccctgctgacg
accttccatttcccgcggccggtatccacgctcgcatgggactccaccgaacgtctattc
ttttctgcatcgccggacggcttcattcaccaagtaaatctgttcagacaacgtgacgac
aagctcagcagaacaatggaagcagtcggtggcgctggctccacggacgtgatacggata
acggacgaagaccagcaagcagcgaggaaaaggctcatcgccgtcgatcaacccgtgatg
agtatgaccatctccctcacgtcctccctcctgctcgtcggcaccgcaagcgggcttgtc
cactcatacgatatcgcctcacatcagctcctccgcacgatctcaacccacaagggcctt
tcaatagcgcacctgcagaccatgctcaagccgcccgacctcgtggggcacgtcagcctc
agcctcagcgcgggcaaccctgcagactcgcgggacacgatacccgtgaggactgtcgcg
ccgttccaacgtatgcgcgatccgaagatgagggaggcgcacgaggtcgcagtcatgctc
ccgccgtcactgacatgggtcctgcagaagcccgtcccggcgttcttcgattacccggtg
gacgagctcctccgcgatcacgcgtccttcgtcccaacttccggggtgcagccgtctggc
gtgtcgctgcagacgcgggtctcggagctcgaatctgaggttgtgcgtctgcgcgagcag
ctcgggcgggcgaagagcatcaacgataccatgtgggagacggtcgtgcagcgggtcgtc
gcggagagccgggagaaggcacaagagggcgaggaaatggatagacagaagagggcgcgt
gtatag

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