Phanerochaete carnosa: PHACADRAFT_166518
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Entry
PHACADRAFT_166518 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K14829
pre-rRNA-processing protein IPI3
Organism
pco
Phanerochaete carnosa
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pco03009
]
PHACADRAFT_166518
Ribosome biogenesis [BR:
pco03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
PHACADRAFT_166518
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_HPS5
ANAPC4_WD40
KNTC1_N
WDR54
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_VPS8
WD40_RFWD3
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_DCAF12
CFAP43_N
Beta-prop_LRRK2
Beta-prop_WDR35_2nd
DUF1192
Motif
Other DBs
NCBI-GeneID:
18909348
NCBI-ProteinID:
XP_007401137
JGI:
Phaca1_166518
UniProt:
K5VTQ2
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MQLQELVLCATTPSLSNPGPGSIALHDIQTGATLASFKQTSAGPHCTAVAHTRDGQGGFM
LAAQPDKSIMNVYNFQKDQLALKIVLPEKLSCIAVDPRGEFCAAGTSQGRLYIWEIASGI
MYNAWDAHYRQVGVLRFTQDSAALLSGSEDSAVNVWSVSRLLDDSTQNELPAPYTTLSDH
TLPITDVVVGAGAFPRCRVLTASVDHSVKVWDLESKSLLTTFHFPRPVSTLAWDSTERLF
FSASPDGFIHQVNLFRQRDDKLSRTMEAVGGAGSTDVIRITDEDQQAARKRLIAVDQPVM
SMTISLTSSLLLVGTASGLVHSYDIASHQLLRTISTHKGLSIAHLQTMLKPPDLVGHVSL
SLSAGNPADSRDTIPVRTVAPFQRMRDPKMREAHEVAVMLPPSLTWVLQKPVPAFFDYPV
DELLRDHASFVPTSGVQPSGVSLQTRVSELESEVVRLREQLGRAKSINDTMWETVVQRVV
AESREKAQEGEEMDRQKRARV
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgcaggagcttgtactgtgtgcgacaacgccatcgctgtccaacccaggtcca
gggtccatcgcgcttcacgacatccagaccggagcgacgcttgcttcatttaagcagacc
tctgcgggaccacactgcactgcggtagcgcacacgcgcgatggacagggcggcttcatg
ctggctgcacagccagacaagtcgataatgaacgtgtacaacttccaaaaggaccagctc
gcactaaaaattgtactgccagagaagctttcatgcatcgctgtggacccaagaggagag
ttttgcgctgctggaacttctcagggtcgtctttatatctgggagatagcgtcgggcata
atgtacaacgcctgggacgctcattaccgtcaagtcggcgtcttacgctttacccaggat
agcgcagcactgctctcaggaagcgaagactcggctgtgaacgtctggtccgtctcgaga
ttgctcgatgactctacgcaaaacgaacttcctgctccctataccacactctccgaccac
acgctccccattactgacgtcgtggtgggagctggtgcatttccgaggtgccgagtcctt
acagcatctgtggaccactccgtaaaggtgtgggatctcgaatcgaaatccctgctgacg
accttccatttcccgcggccggtatccacgctcgcatgggactccaccgaacgtctattc
ttttctgcatcgccggacggcttcattcaccaagtaaatctgttcagacaacgtgacgac
aagctcagcagaacaatggaagcagtcggtggcgctggctccacggacgtgatacggata
acggacgaagaccagcaagcagcgaggaaaaggctcatcgccgtcgatcaacccgtgatg
agtatgaccatctccctcacgtcctccctcctgctcgtcggcaccgcaagcgggcttgtc
cactcatacgatatcgcctcacatcagctcctccgcacgatctcaacccacaagggcctt
tcaatagcgcacctgcagaccatgctcaagccgcccgacctcgtggggcacgtcagcctc
agcctcagcgcgggcaaccctgcagactcgcgggacacgatacccgtgaggactgtcgcg
ccgttccaacgtatgcgcgatccgaagatgagggaggcgcacgaggtcgcagtcatgctc
ccgccgtcactgacatgggtcctgcagaagcccgtcccggcgttcttcgattacccggtg
gacgagctcctccgcgatcacgcgtccttcgtcccaacttccggggtgcagccgtctggc
gtgtcgctgcagacgcgggtctcggagctcgaatctgaggttgtgcgtctgcgcgagcag
ctcgggcgggcgaagagcatcaacgataccatgtgggagacggtcgtgcagcgggtcgtc
gcggagagccgggagaaggcacaagagggcgaggaaatggatagacagaagagggcgcgt
gtatag
DBGET
integrated database retrieval system