Phanerochaete carnosa: PHACADRAFT_167952
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Entry
PHACADRAFT_167952 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K10609
cullin 4
Organism
pco
Phanerochaete carnosa
Pathway
pco03420
Nucleotide excision repair
pco04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
PHACADRAFT_167952
09124 Replication and repair
03420 Nucleotide excision repair
PHACADRAFT_167952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pco04121
]
PHACADRAFT_167952
03400 DNA repair and recombination proteins [BR:
pco03400
]
PHACADRAFT_167952
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pco04147
]
PHACADRAFT_167952
Ubiquitin system [BR:
pco04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
PHACADRAFT_167952
DNA repair and recombination proteins [BR:
pco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
PHACADRAFT_167952
TCR (transcription coupled repair) factors
Cul4-CSA complex
PHACADRAFT_167952
Exosome [BR:
pco04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
PHACADRAFT_167952
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
18909414
NCBI-ProteinID:
XP_007390084
JGI:
Phaca1_167952
UniProt:
K5VCH6
LinkDB
All DBs
Position
Unknown
AA seq
824 aa
AA seq
DB search
MTMAVIDVYTLLSLPSSNAFSAFHSSDFVVEQDSRSDSPTRKVPRLADDSDSASASRARA
AAVADNEHAGEKSATIVLKFHGAPINVQPESVYDKDLALVRRSVRVLLAKGTTESLPATY
EKIYAACQAVVQNARNGEGIYESIKLEMERCFGLLLRDLLETSHTGIAWLQPFIETCSWF
DKQVTLMKSLLAYLDRVYLVSQKKQDIGSLAYSGFYTRIFQHESVVQHIREGLTEWAMWE
REQRTTHEARPLISALVMQLQRHGLYQDILESFYIKKAHEYYVEEAKQLRETLRPGDFCK
HAEDRHDQEIERAKAVLLESSIQKISLETDTALLTAHLDWIANGSMEPLMEGEGPSLDRL
HRMYLLFSAVGGLKILLAAFKLYVTNFVKKIVTDAKMDDQMVDRLLVLKRNCDTVVNEAF
YNEAPIPRVTPSKPSTSMDVDDSPAIEKRANREFGYAVTDAFAEGFKARRNKPAEMIAKF
LDRAMRRGQKGRDDRDYAAELAAALALYRYTDDKDVFRTFYHRALARRLLLEKSASDDHE
KAMLRKLKEEYDPEFGMGDHMFTDLALSRDLTAEYRQKKKGDVDLSLMVLQRSVWPFTAR
KQDIVLPVWMSDELSKFTEFYKEKYKGRKLDWDHALGHATLRARFKAGVKELTVSLYQAV
ILLLFNEIEELSFREIKSQTSMEDGELRRTLQSLACGKKRVLRKQPPGKDVHDDDVFFFS
ADFTDPAFRVHINSIQVKETPEEAKRAQTMIEADRKFALDAAIVRIMKGKKKQHYEQLKT
ATIEAVSKHFHPEVTMIKARIDGLVEQEYLRRDDDDMNVLHYVA
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggcggtcatcgacgtatacacgctactgagtctcccctcttccaatgcgttc
tccgcgttccactcgtccgactttgttgtggagcaagactcacggtcggattcacctacc
cgcaaggtcccgcgtcttgcagacgactctgactctgcgtctgcatctagggcccgcgct
gccgctgtcgcggataatgagcatgcgggcgagaagtcggctactatagtgctgaagttt
catggtgctcctatcaatgtgcaacccgagagtgtatacgataaggacctcgcactcgtt
cggcggtccgtacgtgtattactcgcgaaaggtacaacagagtctcttccagcgacctac
gagaagatatatgcagcatgtcaagccgtcgtacagaacgcgcggaacggagaagggatc
tacgagagcatcaagcttgagatggagcgttgcttcgggctacttctaagagatctgttg
gaaacctctcatacaggtattgcctggcttcagccattcattgagacgtgcagctggttc
gacaagcaagtgactctcatgaagtcgctgcttgcatatctggaccgagtttacctggtc
agtcagaagaaacaagacattgggtccttggcctacagcggtttctacactcgcatcttt
cagcacgagtctgtcgttcagcatatacgcgaaggcttgacagaatgggccatgtgggaa
cgtgagcagcgcacaacgcacgaggctcgcccattgatatccgcgctcgtaatgcaactg
cagcgccacggcttgtatcaagacattctcgagagcttctacatcaagaaggcgcacgaa
tactacgtggaggaggccaaacaacttcgggaaactctccgacccggcgatttctgcaag
catgccgaagatcgccatgaccaagagatagagcgtgccaaagctgttttgctggagtcg
agcatccagaagatctctctcgagacagacactgccctccttactgctcatctggactgg
attgcaaacggctctatggagccactcatggaaggcgaaggcccttcgttggatcgtctg
cacagaatgtacctcctattctctgcagtaggcggtttgaagattttactggctgcattc
aagctctacgtcacgaatttcgtcaagaagatcgtcacagatgccaagatggacgatcag
atggtggaccggcttctcgttctcaaacgcaactgcgacacggtcgttaacgaggctttc
tacaacgaggccccgatcccgagagtgactccctcgaagccatcgacatccatggacgtc
gacgatagcccggccatcgagaagcgcgccaaccgcgagtttggatatgccgtcacggac
gccttcgcagagggcttcaaggcacgccgcaacaagccggcagagatgatcgccaagttt
ctcgatcgtgcaatgcgccggggacagaaggggcgcgacgatcgggactacgctgccgag
ctcgctgcagcacttgcgctgtaccgctacacggacgacaaagatgttttccggaccttc
taccaccgtgctcttgccaggcggctcctgcttgagaagtcagcatcagacgaccatgag
aaggcgatgctgcgcaagctcaaagaggaatatgatcccgagttcgggatgggtgaccac
atgttcaccgacttggcgctctcgcgtgacctcaccgccgagtacagacagaagaagaag
ggcgatgtggatctgtcgctcatggttctccaacgcagcgtctggccatttactgcacgc
aagcaagatatagtcctgcctgtctggatgtcggatgagctgagcaagttcaccgagttc
tacaaagagaagtacaagggcaggaagctcgactgggaccacgcacttgggcacgcgacg
ttgcgcgcccgcttcaaggcgggtgtgaaggagctgacggtcagcctgtaccaggctgtt
attttactgcttttcaatgagatagaggagctgtctttccgcgagatcaaatcgcaaaca
agcatggaggatggcgagctgcgccggacgctgcagagtctggcctgcggcaagaagcgt
gtgctgaggaagcagccgcccggcaaagacgtgcacgacgatgacgtattcttcttcagc
gccgacttcacggatcctgccttccgggtgcacatcaactcgatccaggtcaaggagacc
cccgaggaggcgaagcgcgcgcagacgatgatcgaggcggaccgcaagttcgcactcgac
gcggcgatcgtgcgcatcatgaagggcaagaagaagcagcactacgagcagctcaagacg
gcgacgatcgaggcggtgtcgaagcatttccatcccgaggtgacgatgatcaaggcgcgc
atcgatgggctcgtcgagcaggagtacttgcgcagggacgacgacgacatgaatgtgctt
cattacgttgcttaa
DBGET
integrated database retrieval system