KEGG   Phanerochaete carnosa: PHACADRAFT_167952
Entry
PHACADRAFT_167952 CDS       T03128                                 
Name
(RefSeq) hypothetical protein
  KO
K10609  cullin 4
Organism
pco  Phanerochaete carnosa
Pathway
pco03420  Nucleotide excision repair
pco04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pco00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    PHACADRAFT_167952
  09124 Replication and repair
   03420 Nucleotide excision repair
    PHACADRAFT_167952
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pco04121]
    PHACADRAFT_167952
   03400 DNA repair and recombination proteins [BR:pco03400]
    PHACADRAFT_167952
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pco04147]
    PHACADRAFT_167952
Ubiquitin system [BR:pco04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     PHACADRAFT_167952
DNA repair and recombination proteins [BR:pco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      PHACADRAFT_167952
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      PHACADRAFT_167952
Exosome [BR:pco04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   PHACADRAFT_167952
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 18909414
NCBI-ProteinID: XP_007390084
JGI: Phaca1_167952
UniProt: K5VCH6
LinkDB
Position
Unknown
AA seq 824 aa
MTMAVIDVYTLLSLPSSNAFSAFHSSDFVVEQDSRSDSPTRKVPRLADDSDSASASRARA
AAVADNEHAGEKSATIVLKFHGAPINVQPESVYDKDLALVRRSVRVLLAKGTTESLPATY
EKIYAACQAVVQNARNGEGIYESIKLEMERCFGLLLRDLLETSHTGIAWLQPFIETCSWF
DKQVTLMKSLLAYLDRVYLVSQKKQDIGSLAYSGFYTRIFQHESVVQHIREGLTEWAMWE
REQRTTHEARPLISALVMQLQRHGLYQDILESFYIKKAHEYYVEEAKQLRETLRPGDFCK
HAEDRHDQEIERAKAVLLESSIQKISLETDTALLTAHLDWIANGSMEPLMEGEGPSLDRL
HRMYLLFSAVGGLKILLAAFKLYVTNFVKKIVTDAKMDDQMVDRLLVLKRNCDTVVNEAF
YNEAPIPRVTPSKPSTSMDVDDSPAIEKRANREFGYAVTDAFAEGFKARRNKPAEMIAKF
LDRAMRRGQKGRDDRDYAAELAAALALYRYTDDKDVFRTFYHRALARRLLLEKSASDDHE
KAMLRKLKEEYDPEFGMGDHMFTDLALSRDLTAEYRQKKKGDVDLSLMVLQRSVWPFTAR
KQDIVLPVWMSDELSKFTEFYKEKYKGRKLDWDHALGHATLRARFKAGVKELTVSLYQAV
ILLLFNEIEELSFREIKSQTSMEDGELRRTLQSLACGKKRVLRKQPPGKDVHDDDVFFFS
ADFTDPAFRVHINSIQVKETPEEAKRAQTMIEADRKFALDAAIVRIMKGKKKQHYEQLKT
ATIEAVSKHFHPEVTMIKARIDGLVEQEYLRRDDDDMNVLHYVA
NT seq 2475 nt   +upstreamnt  +downstreamnt
atgaccatggcggtcatcgacgtatacacgctactgagtctcccctcttccaatgcgttc
tccgcgttccactcgtccgactttgttgtggagcaagactcacggtcggattcacctacc
cgcaaggtcccgcgtcttgcagacgactctgactctgcgtctgcatctagggcccgcgct
gccgctgtcgcggataatgagcatgcgggcgagaagtcggctactatagtgctgaagttt
catggtgctcctatcaatgtgcaacccgagagtgtatacgataaggacctcgcactcgtt
cggcggtccgtacgtgtattactcgcgaaaggtacaacagagtctcttccagcgacctac
gagaagatatatgcagcatgtcaagccgtcgtacagaacgcgcggaacggagaagggatc
tacgagagcatcaagcttgagatggagcgttgcttcgggctacttctaagagatctgttg
gaaacctctcatacaggtattgcctggcttcagccattcattgagacgtgcagctggttc
gacaagcaagtgactctcatgaagtcgctgcttgcatatctggaccgagtttacctggtc
agtcagaagaaacaagacattgggtccttggcctacagcggtttctacactcgcatcttt
cagcacgagtctgtcgttcagcatatacgcgaaggcttgacagaatgggccatgtgggaa
cgtgagcagcgcacaacgcacgaggctcgcccattgatatccgcgctcgtaatgcaactg
cagcgccacggcttgtatcaagacattctcgagagcttctacatcaagaaggcgcacgaa
tactacgtggaggaggccaaacaacttcgggaaactctccgacccggcgatttctgcaag
catgccgaagatcgccatgaccaagagatagagcgtgccaaagctgttttgctggagtcg
agcatccagaagatctctctcgagacagacactgccctccttactgctcatctggactgg
attgcaaacggctctatggagccactcatggaaggcgaaggcccttcgttggatcgtctg
cacagaatgtacctcctattctctgcagtaggcggtttgaagattttactggctgcattc
aagctctacgtcacgaatttcgtcaagaagatcgtcacagatgccaagatggacgatcag
atggtggaccggcttctcgttctcaaacgcaactgcgacacggtcgttaacgaggctttc
tacaacgaggccccgatcccgagagtgactccctcgaagccatcgacatccatggacgtc
gacgatagcccggccatcgagaagcgcgccaaccgcgagtttggatatgccgtcacggac
gccttcgcagagggcttcaaggcacgccgcaacaagccggcagagatgatcgccaagttt
ctcgatcgtgcaatgcgccggggacagaaggggcgcgacgatcgggactacgctgccgag
ctcgctgcagcacttgcgctgtaccgctacacggacgacaaagatgttttccggaccttc
taccaccgtgctcttgccaggcggctcctgcttgagaagtcagcatcagacgaccatgag
aaggcgatgctgcgcaagctcaaagaggaatatgatcccgagttcgggatgggtgaccac
atgttcaccgacttggcgctctcgcgtgacctcaccgccgagtacagacagaagaagaag
ggcgatgtggatctgtcgctcatggttctccaacgcagcgtctggccatttactgcacgc
aagcaagatatagtcctgcctgtctggatgtcggatgagctgagcaagttcaccgagttc
tacaaagagaagtacaagggcaggaagctcgactgggaccacgcacttgggcacgcgacg
ttgcgcgcccgcttcaaggcgggtgtgaaggagctgacggtcagcctgtaccaggctgtt
attttactgcttttcaatgagatagaggagctgtctttccgcgagatcaaatcgcaaaca
agcatggaggatggcgagctgcgccggacgctgcagagtctggcctgcggcaagaagcgt
gtgctgaggaagcagccgcccggcaaagacgtgcacgacgatgacgtattcttcttcagc
gccgacttcacggatcctgccttccgggtgcacatcaactcgatccaggtcaaggagacc
cccgaggaggcgaagcgcgcgcagacgatgatcgaggcggaccgcaagttcgcactcgac
gcggcgatcgtgcgcatcatgaagggcaagaagaagcagcactacgagcagctcaagacg
gcgacgatcgaggcggtgtcgaagcatttccatcccgaggtgacgatgatcaaggcgcgc
atcgatgggctcgtcgagcaggagtacttgcgcagggacgacgacgacatgaatgtgctt
cattacgttgcttaa

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