Phanerochaete carnosa: PHACADRAFT_171504
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Entry
PHACADRAFT_171504 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K10756
replication factor C subunit 3/5
Organism
pco
Phanerochaete carnosa
Pathway
pco03030
DNA replication
pco03410
Base excision repair
pco03420
Nucleotide excision repair
pco03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PHACADRAFT_171504
03410 Base excision repair
PHACADRAFT_171504
03420 Nucleotide excision repair
PHACADRAFT_171504
03430 Mismatch repair
PHACADRAFT_171504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pco03032
]
PHACADRAFT_171504
03036 Chromosome and associated proteins [BR:
pco03036
]
PHACADRAFT_171504
03400 DNA repair and recombination proteins [BR:
pco03400
]
PHACADRAFT_171504
DNA replication proteins [BR:
pco03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PHACADRAFT_171504
DNA Replication Termination Factors
ELG1-RFC complex
PHACADRAFT_171504
Chromosome and associated proteins [BR:
pco03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
PHACADRAFT_171504
DNA repair and recombination proteins [BR:
pco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PHACADRAFT_171504
Check point factors
HRAD17(Rad24)-RFC complex
PHACADRAFT_171504
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA
AAA_22
Rad17
Mg_chelatase
ATPase_2
Motif
Other DBs
NCBI-GeneID:
18909559
NCBI-ProteinID:
XP_007393566
JGI:
Phaca1_171504
UniProt:
K5X5W4
LinkDB
All DBs
Position
Unknown
AA seq
357 aa
AA seq
DB search
MSLWVDCYRPKSLDELHYHESLSARLRSLAASGDFPHMLFYGPSGAGKKTRIACTLKELF
GKGVEKLKIDQRVFLTPSRRKLDVNVVQSNFHLEITPSEVGNYDRVVIQELLKEIAQTQQ
VDINARHRFKVVVINEADSLTRDAQAALRRTMEKYMSNMRIILCANSTSKLIAPIKSRCL
LVRVAAPTEEEMVTVMKHVASRQNFRIEDESVVCEIARDAEGNLRKALLVFEALKMQTGS
LNGPITIAKPDWETYCIKVGDMITQEQSPQRVMDVRTKLYELLSHCIPPTVILKTIAARV
VEKVDESLKADIMHWAAVYEVRMRVGNKKIFHLEAWVVKVMSIYKHFFYGIDMGSFE
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtctctctgggttgattgttaccgaccaaagtcgctcgatgaacttcactatcacgaa
agcctctcggcccgcctgcgatctctggctgcttccggagacttcccgcatatgctgttc
tatggaccatcaggagcggggaagaagactcggatagcatgcacgctgaaggagttgttc
ggaaagggggtggagaagcttaagattgaccagcgagtcttcttgacaccatccaggcga
aagctggacgtgaatgtcgtccagagtaattttcaccttgaaatcacacccagtgaggtt
ggtaactacgaccgagtagtcattcaggaactcctgaaggaaattgcccaaacacagcaa
gtcgatatcaacgcgcggcatagattcaaggttgtcgtcatcaacgaggctgactctctc
acccgtgatgctcaagcggctctccgtcggacgatggagaagtacatgtcgaacatgcgc
atcatcctttgcgcaaatagcacaagcaagctcattgccccgatcaagagtcgatgtctt
ctggttcgagtggcggctcctacagaagaagagatggttacggtcatgaagcacgttgca
tctcgccaaaacttccggatagaggacgagagtgtagtttgcgagattgctcgggatgca
gaaggcaaccttcggaaagcgctgctggtgttcgaagctctgaaaatgcagactggcagt
ctcaacggtccgataacaatcgcaaaacccgactgggaaacttattgcatcaaggtcggg
gatatgatcacccaagagcagtcgccacaacgagtgatggacgtgcgaacgaagctctac
gaactcctctctcactgtatacctcccactgtcatcctgaagacaattgcagcacgtgtg
gtcgaaaaggtcgatgaaagcctaaaggctgatatcatgcactgggcggccgtgtatgag
gttcgcatgcgcgtgggcaacaaaaagatcttccacctcgaggcatgggttgtcaaggtt
atgagcatatacaagcacttcttctatggtattgatatgggctcatttgagtga
DBGET
integrated database retrieval system
