Phanerochaete carnosa: PHACADRAFT_172766
Help
Entry
PHACADRAFT_172766 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
pco
Phanerochaete carnosa
Pathway
pco04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
PHACADRAFT_172766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pco04121
]
PHACADRAFT_172766
03036 Chromosome and associated proteins [BR:
pco03036
]
PHACADRAFT_172766
Ubiquitin system [BR:
pco04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
PHACADRAFT_172766
Chromosome and associated proteins [BR:
pco03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
PHACADRAFT_172766
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_WDR75_1st
Beta-prop_EML
F-box-like
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_DCAF4
NBCH_WD40
F-box
Beta-prop_Nup120_160
Beta-prop_VPS8
Beta-prop_EIPR1
WDR90_beta-prop_4th
WD40_like
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
PQQ_2
Beta-prop_Vps41
WDR54
Motif
Other DBs
NCBI-GeneID:
18909609
NCBI-ProteinID:
XP_007394907
JGI:
Phaca1_172766
UniProt:
K5WCT0
LinkDB
All DBs
Position
Unknown
AA seq
677 aa
AA seq
DB search
MLRSMVLNSIIDDDAESAPPFSRLLSSFLGSPFITTSDLPPSDLSLIRRLDAGADLEAVD
GAFAAVPRAETVTRPASPTPSFATDTYSLINWTEKGDWASAQPRPSLSDSAPSCSLLPSG
SRRSASYTYSYASPSTPFNSFRISNSSSPKGSRNFNLLPRLWEALRDSSPARKGKRRFDI
ASDDLWTEFGGNGYIDYANLPPLDGEEGELIDDEACFIDVRAVTGLDIIANIPDELALHL
LSFLDLPDIVACLRVSRTWGRLASDNAVWRSLFARKRGSGWLLDLRRLRYPALSASAAIL
PPQDLSRSRTFELPAPLELDWYNLYKSRAELDHRWSASPFTGRNGEDKENAKAWEPRIRR
MLGHTDSVYCLEFDSSRIITGSRDRTIKVWSLKTGRCLATFIGHGGSVLCLKFEHDFDLD
DTNALPEGQGWKKGMMVSGSSDCTVVVWNLYSYPATDDGDDEFTTVAEVRGILRGHTGGV
LDLRIENNWIISCGKDAAVLVWDRSTLTLHRAFRGHDGPVNAVGVQGNRLASASGDGKMI
LWDMSTGERLRTFDAHDRGLACIEFKGDLIVSGSNDCKIKVWSASTGECLRTLTGHDMLV
RTLSYDPFSGRLVSGSYDRSIKVWDVQTGKVVREFRGLHYSHIFDIKFNCCRIVSVSHDQ
QIVVLDFTDGLDTSLFI
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtagcatggttctcaactcgatcatcgacgacgacgcggagtcggccccgccg
ttcagtcggctgctcagctctttcctgggttctcccttcattacaacctctgatctccca
ccttccgacttatctctcatacggcgactcgatgccggagcagacctcgaggctgtcgat
ggtgccttcgccgcggtgccacgcgcggagacggtcactcgacccgcttcgccgacgccc
agcttcgccacagacacctactcgctgatcaactggacagagaagggcgattgggcctcg
gcacagccacgaccatccttatcagactctgccccgagctgctcactcctcccctctggc
tctagacgttcggcgtcgtacacgtactcctacgcttcgccctcgacgcccttcaactcg
ttccggatatcgaactcaagcagccccaagggctcccgcaacttcaatctgctgccacga
ctctgggaggccctgcgcgactcgtcgcctgcgaggaagggcaagcgacgattcgacatc
gcctcagacgacctctggaccgagttcggggggaacggctacatcgattatgcgaaccta
cccccacttgacggcgaagagggagaactaatcgacgatgaggcatgtttcatcgatgtc
agagctgttacaggcctggatatcattgccaatatcccagatgaactggccttgcacctg
ctttccttccttgaccttcccgacatcgtcgcatgtctacgcgtatcaagaacatggggt
agactggcctcggataacgcagtatggcgttcactgtttgcacggaaacgaggctcgggc
tggttgcttgacctccgtcggctgaggtaccccgcgctgtctgcttcggctgcgatctta
cctccgcaagatctaagtagaagtcgcacgttcgagctccccgctcctcttgaactagat
tggtacaacctctacaagagtcgagctgagcttgaccacagatggtctgccagtccattc
actggcaggaacggcgaagacaaggagaatgcaaaggcttgggaaccccgcattaggagg
atgcttggacacacagatagtgtgtactgcctcgagttcgactcttcccgaatcatcact
gggtcacgcgaccgcactatcaaagtttggagtctcaagaccggccgctgcttggccacg
ttcataggtcatggaggaagcgtgctctgcctaaagttcgagcacgacttcgatctcgac
gacaccaatgccctgcccgagggccagggttggaagaagggcatgatggtcagcgggtcg
agcgactgcaccgtcgtcgtttggaatctctactcttatcctgcgactgacgatggcgac
gacgagttcaccacggttgctgaggtgcggggtattcttcgtggccataccggaggtgtt
ctcgatcttcgcatcgagaataactggattatcagctgtggcaaagacgcggctgtgctg
gtgtgggaccgctcgacgctgactctacaccgtgcgttccgcggccatgacggtccggtg
aatgctgtcggtgtacagggcaatcggctggcaagcgccagtggtgatggcaagatgatc
ctctgggacatgtctactggagagcgtctacggacattcgatgcccacgaccgcgggctc
gcttgcattgagttcaagggtgacctgattgtctcgggctcgaacgattgcaagatcaaa
gtctggagcgcctccactggggaatgcttgcggaccctcactgggcacgacatgcttgtt
cgcacgctgtcttacgacccgttcagcggtcgactcgtcagtggcagctacgatcgtagc
atcaaggtctgggatgtgcagaccggcaaagtcgttcgcgagttccgcgggctgcattac
agccatatctttgacatcaagtttaactgctgtcggatcgttagcgtctctcatgatcaa
cagattgtcgttcttgatttcacggatggcctcgatacttcacttttcatctaa
DBGET
integrated database retrieval system