Phanerochaete carnosa: PHACADRAFT_172822
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Entry
PHACADRAFT_172822 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
pco
Phanerochaete carnosa
Pathway
pco03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
PHACADRAFT_172822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pco03400
]
PHACADRAFT_172822
DNA repair and recombination proteins [BR:
pco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
PHACADRAFT_172822
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
PHD_NSD
C1_1
Motif
Other DBs
NCBI-GeneID:
18909612
NCBI-ProteinID:
XP_007394957
JGI:
Phaca1_172822
UniProt:
K5WDM2
LinkDB
All DBs
Position
Unknown
AA seq
517 aa
AA seq
DB search
MATPVTRSTLVNHCVPPFYACYLLRSVKTSKSMATYIGSTPSPPRRIRQHNGEITQGARK
TERNRPWVMQMIVCGFPSKLAALQFEWAWQHPHISRHLRRGDGKAKVAHGMICSHPYNTW
ALHVKLFTEEAAKTWNVLYRKESPPLGFTSAVELEGVDGKSGKTGSGRTGPIDVTDAQFT
TSHLYKAYSLAGPYYCSVCKEPITDFPSNALDIALCPAPGCKSLSHLTCLAKSFVPSTSV
SSTAPLIPRGGCCTACKIYVLWGDVVRGCYRIHKGGAVEVLEDSEDEMSEEDEGMDTDAD
TDAMDVDSEKHSELKTPKEKGKAKPRVIATTKPRGRSRKAVDAKEPKAKDSRIKPARVPV
PAIEEEGEFFDIDNIGSSDSGSTADIIPQPTARGRGRQPKSITSVTNSAAPIQPASTLPL
PAKKRGRPQKHIVELESVAPSQIAPASPPARKLGRLMKRPEEVDFFDVKSDGELEDALSE
LSISSPDLSGMENEVFGGALQRRPSVSRKAEYIEISD
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggctactccggtgaccagatcaacccttgtgaatcactgtgtcccaccgttctacgct
tgttatttgttgagaagcgtgaaaacatcaaagtcgatggcgacctacatagggagtact
cctagtcctcctcgtcggatacgccagcataacggggaaatcactcagggagcgcggaag
actgagcgcaatcgtccatgggttatgcagatgatcgtgtgcggctttccctccaagctt
gccgctctccagtttgaatgggcgtggcagcacccgcacatctcccgccatctgcggcgc
ggagatgggaaagcgaaggtagcgcacggaatgatctgctcgcatccatacaatacctgg
gccctgcacgtaaagctcttcacagaagaagccgcaaaaacatggaatgtcttgtaccgg
aaagaatctccacccctaggctttacgtcggcagtcgagctcgagggtgtcgacggtaaa
agcgggaagaccggctctggaagaacgggtcctatagatgtcacagatgcccagttcact
acatcgcatctatacaaggcgtattcccttgccggcccgtactattgctctgtatgtaaa
gagcctataacagacttcccttcaaatgccttggatattgccctctgccctgctcccgga
tgcaaatcgctctcccacctcacctgccttgctaagtcctttgttccctctacttctgtc
tcttcgaccgctcccttgattccccgtggtggctgttgcaccgcttgcaagatctacgtg
ctgtggggagatgttgtgcgtggatgctatcgtatccacaagggcggggctgtcgaggtg
cttgaagattccgaggacgagatgtctgaagaagacgagggcatggataccgatgcggat
acagatgcgatggacgtggactccgagaagcattccgagctgaagactccgaaagagaaa
ggaaaggcaaaaccaagggtaatagccacgacaaagcctaggggaagatccagaaaggct
gtggatgcgaaagagcctaaagcaaaagattcgaggatcaagccagcaagagttccagtt
ccagccatagaagaagaaggcgaattcttcgatattgacaacatcggttcgagcgactct
ggaagtacagccgatataataccacagcccacggccaggggacgtggcagacagccgaaa
tcaataacatcagtcacaaatagtgctgcaccaatacagccagcttcaacattgccccta
cccgctaagaagcgagggcgaccgcaaaagcatatagtcgaactagaaagtgtcgcgcct
tctcaaattgcacctgcatcgccgccagctaggaagcttggccggctcatgaagcgtcct
gaagaggtcgatttcttcgacgtgaagtcggacggcgagctcgaggacgcactgtccgag
ctatctatctcgtcgccggacctgtcagggatggagaatgaggtcttcgggggtgctttg
caacgacgaccatctgtgtctcgaaaagctgaatacattgaaatctccgactag
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