Phanerochaete carnosa: PHACADRAFT_173301
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Entry
PHACADRAFT_173301 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
pco
Phanerochaete carnosa
Pathway
pco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PHACADRAFT_173301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pco03400
]
PHACADRAFT_173301
DNA repair and recombination proteins [BR:
pco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
PHACADRAFT_173301
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Rad54_N
Helicase_C
HDA2-3
ResIII
ERCC3_RAD25_C
AAA_22
U1snRNP70_N
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
18909628
NCBI-ProteinID:
XP_007395555
JGI:
Phaca1_173301
UniProt:
K5W8B5
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MLKRAPTTTDGRIVDRLQESVRVNKPFKPPTLAVQREQSQRKRKRVSYKGAQADGDDDDE
PKSKKKKDMLDGPRDNNIQSAPVYKPKPFDQVSRRFSIPSMKNAAGEYVQKPMSNVALGI
RPVANIIPRPLHDPMEDHAIVLYDPTVDDRETDEERKERELEEEKERAAKEAREKIAGLY
NPHKSLREILGGGTKKKLNKKVPVVIDPRLGKVLRPHQIEGVQFMFKATTGMIVEHQYGC
IMADEMGLGKTLQCLTLMWTLLKQSPHAGRSTAERVIIACPASLVKNWGNEIVKWLGPGV
VGTVLLDGTDNLGKARRWIEQPRGRNCTNPVLITSYEYLRTLGESYPSICEMEIGLLLCD
EGHRLKNTESKTWQVLSTLKAKRRVILTGTPIQNDLTEYFSLLSFALPTYLGTRNEFRKN
FENAIIRGRDADASDAVREKSEQKLKDLAALVSKFIIRRTNDLLSKYLPVKYEHVVFCHM
SDIQRDMYCHFVDHPQTKTELRGKEAKPLVAINILKKLVNHPELLPIGKETKHAEWDNKK
DAEKEMEMRDVHTEWSGKFLVLERFLDKMRQETNDKIVLISNYTSTLDVFEKLLRAKRYG
YFRLDGKMNVKKRQEVVDKFNNPEVPEFVFLLSSKAGGCGINLIGANRLILFDPDWNPAS
DQQALARVWRDGQKKECFVYRFICTGTIEEKVFQRQAQKQSLSSAVVDEKEDVERFFSRD
NLRQLFKYNDKTLCETHETFKCKRCKNGKQFMKSQALLYGDASTWNHYTNEELRNNHDDL
LRAETGLPEISFVFQYISH
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagcgggcacccacaacgacggacggccgaatcgtcgaccgtctacaagaaagc
gtacgcgtcaacaagccattcaagcctcctacacttgccgtacagcgagagcagtcgcaa
cgcaaacgcaaacgcgtgtcatataagggtgcgcaggcggatggcgacgacgacgacgag
ccgaaatcgaagaagaagaaagatatgctcgatggtccgagggacaacaacatccagagc
gcccctgtatataagcccaagcctttcgatcaagtctcccgacggttctccataccgtct
atgaagaatgctgcaggagagtatgtgcagaaacctatgtccaacgtagctctcggtatt
cgccctgtcgccaatatcatccctcgtcctctccatgaccccatggaagatcacgctata
gttctgtacgatccgacagtcgacgacagggagaccgacgaagaaaggaaagagcgtgaa
ttggaagaggagaaagagcgtgcggcgaaggaagctcgtgaaaagatagcgggattgtat
aaccctcacaagagtttaagagagatccttggtggtgggactaagaagaagctgaacaag
aaggtcccggtggtcattgaccctcgactaggcaaggtccttcggccccatcaaattgaa
ggtgtacagtttatgttcaaggcgaccaccggaatgattgtcgaacaccaatatggttgt
atcatggccgatgagatgggtctgggtaagaccttacagtgcctcactcttatgtggaca
ctgctcaagcagtcaccgcatgccgggaggtctactgccgagagggtcatcattgcgtgt
cccgccagtctggtcaagaactggggcaacgagattgtcaagtggctcggcccaggtgtc
gtcgggacagtgcttctcgacggcacagataacttagggaaggctcgtcgttggatagaa
cagccaaggggacgtaattgcacgaacccagtcctaataacgtcttacgagtatctacgc
accttaggagaatcgtatccctcaatttgtgagatggagattggccttctcctctgtgat
gagggacatcgtctcaaaaacactgaatccaaaacatggcaggtgttatccacgctgaaa
gccaaacgcagggtcatcctcactggcacaccaatccagaatgatctcacagagtacttc
tctctcctcagtttcgcactgcctacgtatctgggaacgcgaaatgagttccgcaagaat
ttcgagaacgcgattattcgaggacgcgacgctgatgcatcggacgctgtcagggagaag
agtgagcaaaagctcaaagatcttgctgctctcgtatccaagtttatcattcgccgcacg
aatgacttgctctccaaatacttgcctgtcaagtatgagcacgtcgttttctgtcacatg
tctgacattcaacgagacatgtactgccacttcgtggaccacccacagacgaagactgaa
ctccgcggcaaagaggccaagccgctggtcgctatcaatattctgaagaagctcgtcaac
cacccggagctcctccctatcggcaaggaaactaagcatgccgaatgggataacaaaaag
gacgccgagaaggaaatggagatgagagacgtacacactgaatggagcggcaaattctta
gtcctggagaggttcctggacaagatgagacaagagacgaatgacaagatcgtccttatc
agtaactatacaagtaccctggacgtcttcgagaagctgctacgggccaagaggtacgga
tacttccgtctcgatggtaagatgaacgtcaagaagaggcaggaggtcgtcgacaaattc
aacaaccctgaggtccctgagttcgtcttcctgctcagtagtaaggccggcggctgtggc
atcaacctcatcggcgcgaataggctcattctgttcgaccctgactggaaccctgcttcc
gaccagcaggcactcgcgcgtgtgtggcgtgacggccagaagaaagaatgttttgtgtac
cgcttcatttgtacgggcaccatcgaagagaaggtcttccagcgccaggcgcagaagcag
tcgctgtcgtcggctgtcgtcgacgagaaggaggacgtcgagcggttcttctcgcgcgac
aacctgcggcagctgttcaaatacaacgacaagacgctttgtgagacacacgagacgttc
aaatgcaagcgatgcaagaacggcaagcagttcatgaagtcgcaggcgctgctttacggt
gatgcgagcacgtggaatcactacacgaatgaggaactcaggaataatcatgacgatctc
ctgcgagctgaaactgggcttcctgagatctcgtttgtcttccagtatatcagtcactga
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