Phanerochaete carnosa: PHACADRAFT_173464
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Entry
PHACADRAFT_173464 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K11360
transcriptional activator SPT8
Organism
pco
Phanerochaete carnosa
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pco03021
]
PHACADRAFT_173464
03036 Chromosome and associated proteins [BR:
pco03036
]
PHACADRAFT_173464
Transcription machinery [BR:
pco03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
PHACADRAFT_173464
Chromosome and associated proteins [BR:
pco03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
PHACADRAFT_173464
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_SPT8
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_EML
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
18909634
NCBI-ProteinID:
XP_007395679
JGI:
Phaca1_173464
UniProt:
K5VV19
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
MDSEEEALDDLEFNGSSDDEENEIDEDILDALEEDLAAEEAASEAAAEESITDDSDIDSD
DDNDDDEQPPPSSAILINEPQLSIPQPAEAALAPSMGPSPPLASPRGEHISGKSPTPAPR
KRSLSPAGLRKARLLADLRWPRSFTVEAICAIPHPYPTHCLASSLCMSHLLTGSDDGYIR
DYDIFTGVNGKVYLTAPQRHHCGVMEGLMKAAQIRLWWENPVNLAAMPGPVDEPPLCAPY
SLLMHSDALWSLAGTEPGHISLFTVRHEPGRLCHIFPGHRGPVSAMSMAHDEKGFFSAGW
DGEAMQWDLNTGQVVRAFTSHGAQLTAIGVRPLSSASNGPSWIDESKYASGPPMGSNMLK
QEDVPETMIQDEPLSEAKYTIQQDDDEKSDFDPLFDDPDADGDSIMQTNTQPPAQPNGLV
NSSAASANVQPQPQQPRQPVVWGNAPNAPPVLDPVAYSCFSPDVLMTAAIDGQVMLWDKR
VNSPGYGVGRLPMGEKTRPWCVSACWSTDGSQIYVGRRNAIIDVWDVRQTGSAHMGTPRL
LKTLRNPPVSGDISCVVAFPDGRHLACASNDNIRLWNVAEAYEPDASGKFKSGVQFKIIP
GHHGGIISQMLVDRQARFLISASSNRGWHGESTKTVFVHEVKSIW
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggactcagaggaggaggccctcgacgatctcgagttcaacggctcttctgacgatgag
gagaacgagattgatgaagacattcttgacgctcttgaagaagatctagccgcagaggag
gctgcctcagaggcagcagcagaggaatcaatcacagacgactctgacattgactcagac
gatgacaatgatgatgacgagcagccgccaccatcgtctgctatactcatcaatgaacct
cagctgtccataccacagccagctgaagcggcccttgcgccatcaatgggaccctctccg
ccgttggcatcccctcgcggagagcatatttccggaaagtcaccaacccctgctcctcgc
aagcggtccttgtctcctgctggccttcgtaaggccagacttttggcagacctgcgatgg
ccacgatcattcactgtcgaagctatttgtgctataccacacccctaccctacccactgc
ttagcctcctcgctgtgcatgtctcaccttctaacaggctcggacgacggatatatacgc
gactacgacatattcacgggggtgaacggaaaggtttacctaacagcacctcagagacat
cattgcggtgttatggagggcctcatgaaggccgcacaaattaggctctggtgggaaaat
cccgtaaacctggctgcaatgccgggtcccgttgatgagccgcccctctgcgcgccatac
agcttgctgatgcactctgatgctctgtggtcactagctggtacggaacccggccatatt
agcctgttcactgttagacatgagcccggtagactatgtcacatcttccctggtcaccgt
gggcctgtctcagccatgagcatggcacatgatgagaagggcttttttagtgcaggctgg
gacggagaagccatgcaatgggacctcaacaccggacaggttgttcgggcattcacttct
catggcgcgcagctaactgccatcggtgtccgccctctgtcgagtgcttccaacggtccg
tcatggatcgacgagagcaaatacgcatctggtcctcctatggggagcaacatgcttaag
caagaggatgtgccagaaaccatgattcaggacgagcccttgtctgaggctaaatacacg
atacagcaagatgatgacgagaagtcagactttgatcctttgtttgacgatcccgatgcc
gatggcgactcgatcatgcagacgaacactcaaccgccagcacagccaaatggcctcgtc
aattcttctgccgcatcggcaaacgtccaacctcaacctcagcagccacgccaaccagtc
gtctggggtaatgccccaaatgctccaccggtgttggacccggtcgcatacagctgcttc
agccccgacgtgctgatgacggctgcaatcgacggacaggtcatgttatgggataagcgg
gtaaattctcccggatacggcgtcggcaggcttcctatgggtgagaagacgcgcccttgg
tgtgtctctgcatgctggagtacagacggtagccagatatatgtcgggcggcgtaatgct
attatcgacgtctgggacgtccgacagactggttcagcgcacatgggtactcccaggctg
ctgaagacgttgcgcaaccctccggtatctggcgatatctcgtgtgttgtggcgttccct
gacggcagacatctcgcttgcgcatcgaacgacaatatacgattgtggaatgttgctgaa
gcctacgaaccagacgcgtcggggaagttcaaaagcggggtacaattcaagatcattcct
ggtcatcatggtggaatcatttctcagatgctggtcgacagacaagcccgatttctgatc
agtgcgagtagtaatcggggatggcatggtgaatccaccaagaccgtttttgtgcacgag
gtcaagagcatctggtga
DBGET
integrated database retrieval system
