Phanerochaete carnosa: PHACADRAFT_173831
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Entry
PHACADRAFT_173831 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K14290
exportin-1
Organism
pco
Phanerochaete carnosa
Pathway
pco03008
Ribosome biogenesis in eukaryotes
pco03013
Nucleocytoplasmic transport
pco03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PHACADRAFT_173831
03008 Ribosome biogenesis in eukaryotes
PHACADRAFT_173831
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
PHACADRAFT_173831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pco03019
]
PHACADRAFT_173831
03009 Ribosome biogenesis [BR:
pco03009
]
PHACADRAFT_173831
03016 Transfer RNA biogenesis [BR:
pco03016
]
PHACADRAFT_173831
03036 Chromosome and associated proteins [BR:
pco03036
]
PHACADRAFT_173831
Messenger RNA biogenesis [BR:
pco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
PHACADRAFT_173831
Ribosome biogenesis [BR:
pco03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
PHACADRAFT_173831
Pre-60S particles
PHACADRAFT_173831
Transfer RNA biogenesis [BR:
pco03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
PHACADRAFT_173831
Chromosome and associated proteins [BR:
pco03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
PHACADRAFT_173831
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
Motif
Other DBs
NCBI-GeneID:
18909652
NCBI-ProteinID:
XP_007395991
JGI:
Phaca1_173831
UniProt:
K5WYT8
LinkDB
All DBs
Position
Unknown
AA seq
1074 aa
AA seq
DB search
MEGILDFSREFDVSLMDKVAMAFYAGSGQEQQMAQQVLTQFQEHPDAWTRVPDILERSSF
PQAKYIGLQILEKLILTRWKSLPEGQRQGIRNFIVGITVKIASDEATLRREKTYVNKLNL
ALVQILKQEWPHNWPTFISELVESSKTNLSLCENNMVILRLLSEEVFDFSAEQMTQAKVK
NLKNQMCGEFSEIFKLCSEILEEAQKTSLIRATLETLLRFLNWIPLGYIFETTIIDLLLN
RFLEAPEFRNVTLKCLAEIAALNVGPEYDPKFVILFAMVMTSVNRMIPPSTNIAQAYANA
GDAGQELVLNLALFLCNFLSNHLRAVETEQNRDVLLNAHLYLVKISQVDEREIFKICLEY
WLKLVAELYEEIQSLPIGDSGLLMGLSLGGSQSMLNGMNLRKTIYSDVLSNLRLVVIEKM
VKPEEVLIVENEEGEIVREFMKESDTIVLYKQMRELLVYLTHLDVQDTETILTEKLAKQV
DGSEWSWQNLNTLCWAIGSISGAMNEETEKRFLVTVIKDLLGLCEIKRGKDNKAVVASDI
MYIVGQYPRFLKAHWKFLKTVVNKLFEFMHETHEGVQDMACDTFIKIAQKCRRHFVMQQA
GETEPFVDEILRMLHRITVDLSPQQVHTFYEAVGYMISAQPNKPQQEKLIAKLMELPNNA
WDSLMAQAAQNMDVLGNMDNIKILSNVLKTNVAACTSIGAFYLPQIARIFLDMLGLYKAV
SGIISETIAREGLIATKTPKVRQLRTIKKEVLKLMETFIRKAEDLETVNGNFMPPLLDAI
LGDYNRNVPAARDAEVLNVMATIISRLGPLLTPQVPAILDAVFEPTLNMINQDFAEFPEH
RVGFFKLLRAINLNCFPALLTIPPQQFKLFMDSIIWAIKHTMRDIAETGLNLCLEVINNF
ATADSGVANAFFQQYFLSIMQDIFYVLTDTDHKSGFKLQSMLLARMFQLVETNQITVPLF
DPSQVPDPSINNTVFLREYTANLLKSAFPHVQNAQIQTFVMSLGEFHNDINRFKLALRDF
LIQLKEFSAGDNAELYLEEKEDEAQRKAQEEREAAMRIPGMLKPSQIEDKDEDI
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atggagggcatactcgacttttcgagggagtttgacgtctcgttaatggacaaggtcgcc
atggctttctatgccggttctgggcaggaacaacaaatggctcagcaagtgctcacacaa
tttcaagagcatccagatgcatggactagggttcccgacatccttgaacggtcatctttt
cctcaggcgaaatatataggacttcagatcctcgagaaattgattctcacgcgatggaag
tcattaccagagggccagcggcaaggcattcgaaacttcattgttggcataactgtcaag
atcgcgtcggacgaggccaccctccggagagaaaagacatatgtcaacaagctcaatctt
gctttggtgcagatcctgaagcaagaatggccacataactggccgacattcatttccgag
cttgtggaatcctccaagacgaatctctcactgtgcgagaacaacatggtcatcttgcga
cttctctccgaggaggttttcgacttctctgccgaacaaatgactcaggcaaaagtcaag
aatctcaagaatcaaatgtgtggcgagttctctgaaattttcaagctttgctccgagatc
ctcgaggaggcccagaagacttcgctcatcagggctacccttgagaccctgcttaggttc
ctcaattggatacctctgggatacatcttcgagacaacaataatcgatcttttgctgaac
cgattcctggaagctccagaatttcgtaatgtcacgctcaagtgtctcgcagagattgcg
gcgctcaatgtgggtcccgaatacgacccgaaatttgttatccttttcgcgatggtcatg
acctcagtcaaccggatgattcctccgagcacgaacattgcccaggcgtacgcaaatgcg
ggcgatgctggccaagagctcgtcctgaaccttgcgcttttcctctgtaacttcctatcg
aaccaccttcgcgctgtagagaccgagcagaatcgtgatgtactgctcaatgctcatctc
tacctcgtcaagatctcccaggtcgatgagcgagaaatcttcaagatctgtcttgagtat
tggctcaagcttgtcgctgagctgtacgaggagatccagagtctacctatcggcgactcg
gggcttctcatgggcctcagtctcggtggttcgcagagtatgctaaacggcatgaatcta
cgcaagaccatatacagtgatgtgctctcgaacttgcggttggttgtcatcgagaagatg
gtgaagcctgaggaggttctcatcgtcgagaacgaggagggagagattgtacgtgagttc
atgaaggagagtgacaccattgtcctctacaagcagatgcgcgaactacttgtgtacctc
acccacctggatgttcaagacaccgagaccattctcacggagaagcttgccaagcaagtg
gacggctccgaatggtcgtggcagaacctcaatactctgtgctgggctattggatccata
tccggcgccatgaacgaggagactgagaagcgctttttggtcaccgttatcaaggaccta
cttggtctatgcgagatcaagcgcggcaaggacaacaaagccgttgtggcatcggacatc
atgtacatcgtcggccagtatcctcgtttcctcaaagcgcattggaagttcctcaagaca
gtcgtcaacaagttattcgagttcatgcacgagacccacgaaggtgtccaagacatggcg
tgcgatacgtttatcaagattgcgcagaagtgtcgtcgccactttgtcatgcagcaggca
ggcgagaccgagccattcgtcgacgagatcctccggatgctgcatcgcatcaccgtcgac
ctgtcgccgcagcaggtgcacacattctatgaggccgtcggctacatgatttctgcgcaa
ccgaacaagcctcagcaagagaagctcattgcaaaacttatggagctgcccaacaacgcc
tgggactcgctcatggcgcaagcggcacagaatatggatgttctcggtaacatggataac
atcaagattctctctaatgtcttgaagacgaacgtcgcggcgtgtacctccatcggcgca
ttctacctcccgcagatcgcacgtatattcctcgacatgcttggcctatacaaggccgtc
agcggtattatcagcgagactattgcgcgcgaaggcctgatcgcgacgaagacgccgaaa
gtccgccagctcaggacgatcaaaaaagaggtcctcaagctcatggagacattcatcagg
aaggccgaggatcttgagactgtgaatggcaacttcatgcctcctctcctcgacgcgatc
cttggtgactacaaccgtaacgtccctgcggcgcgcgacgccgaggtgttgaacgtcatg
gctacgatcattagcaggctaggacctctattgacgccccaggtgcccgcaatcttggat
gctgtgtttgagccaacactcaacatgatcaatcaagacttcgccgagttccctgaacat
cgtgttggctttttcaagctactccgtgcgatcaacctgaactgcttcccggctctcttg
accatcccgccacaacaattcaagctgttcatggatagtatcatctgggctatcaagcac
acgatgcgtgacattgccgagaccggcctgaacttgtgtctggaagtcattaataacttc
gccaccgccgactcaggagttgcaaatgcgttcttccaacaatacttcctgagcattatg
caggatatattctatgtcctcacagacacagatcataagagcggcttcaagctgcagagt
atgctcctcgcgcgcatgttccagcttgtagagacgaaccagatcactgtcccgttgttc
gacccatcacaagtgccggatccgagcattaacaatacggtcttcctacgggagtacaca
gcgaatctcctcaagtcagcattcccccacgtgcaaaatgcgcaaatccagacgttcgtg
atgagcctaggcgagttccacaacgacattaaccggttcaagctggcactgcgcgacttc
ttgatacagcttaaggagttctcggctggcgacaacgcagagctgtatctcgaggagaag
gaagacgaagctcagcgcaaggcacaagaagagcgcgaggccgcaatgcgtatccccggc
atgctcaagccgtcgcagatagaggacaaggacgaggacatctaa
DBGET
integrated database retrieval system