Phanerochaete carnosa: PHACADRAFT_177064
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Entry
PHACADRAFT_177064 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
pco
Phanerochaete carnosa
Pathway
pco03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PHACADRAFT_177064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pco03400
]
PHACADRAFT_177064
DNA repair and recombination proteins [BR:
pco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
PHACADRAFT_177064
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_2
BHD_1
Transglut_core
Tli4_C
Motif
Other DBs
NCBI-GeneID:
18909771
NCBI-ProteinID:
XP_007399451
JGI:
Phaca1_177064
UniProt:
K5WMU1
LinkDB
All DBs
Position
Unknown
AA seq
983 aa
AA seq
DB search
MQPESSPVIGSESDDDFDWEEVEVPLQDQGNISLFPSEAPSGSSTPAPNIEITIRTKPKQ
DDTAKKRAAELYAARITRLTCHKAHTLLLLANARTRNKWINDQLLHARLMSLTPISLQNG
FAGLHKSRIPDAAVRGYMFQSAVERLVTWWIDFFTVLPTGHIRSRIFEEVQEELARNEAM
RKADRKGKGRVRDVDEEEDKGEVIRNEKSLMKHALMRKGSRDTSAQLFTALCRALGIPAR
LVVSLQSVPWQAKVGQPKPSPKKDKKKDTKGKQKATQDDDDEGDMEQVDIPTPGKAFLGN
GQRLDGSSTPAGSDKGKQKAPPVINLRKSKGRKLGSAPIKPPKKRDRTPDPTRSAPVFWT
EVFSRADAKWLPVDPVRGYVNKRGAFDPSLPINSPQGTRVENRMVYVVAFEEDGYSRDVT
PRYAKEYGAKVTKMQQGGKGKKEWWESVMRIITRPFRLNRDDLEDEELQTNQLTEKMPET
MAGFKNHPLYVLERHLRRDEVVYPLVELGKFRGESVYPRANVLALKAAENWMRQGRKVRE
GCQPMKWVKQNAVTVNKRRAVEMALAERDRLPIAGEGEGFSSEKDIMQGLYAQSQTELYV
PDPVVDGKIPKNDFGNIDLYVPTMLPAGAAYIPHKGAAKVALQLGFDHAEAVTGFEFKKR
RAFPVITGIVVAAENEQAVLEAYWEAEQEAEKKRRTKEQEQVIKRWQRLIQGLRVRQRVQ
EQYAGPGEPRHAASGPTPENQAQETQEAGGFLTTADDVVKPYTLPRNFHEVLPEHAVVSD
KTEVRAESSGNTRDEVNVITPRSPSQLTLETYDIEEDDEPLEEVQVPETHTPVGGVIKSM
AELAAAHTHVQENTADASAVETLPVPAVHIATPRVNIRPSRGGTSTPAKTNGEAANRKTS
NGRPSTGKQPARRGRKRGRDDDDGSAESEADEPVRASPVKRARTAAAPPVKSDRVLRSRK
GKTEAQIHVEREEEEAFRRAVAK
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgcagccagaatcgagtccggtaatcgggagcgagagtgacgacgattttgattgggaa
gaggtcgaggttccattgcaggaccagggaaacatatctctttttccgagcgaagcacct
tctggttcgtccactcccgcccccaacattgagatcactatccggacgaaacccaagcag
gatgataccgcaaagaagagagccgcagagctatacgctgctcgtatcacgcgcttgacc
tgccacaaagcccacacactgctcttgcttgccaatgcgcggaccaggaacaagtggatc
aacgaccagctattgcacgctcgactcatgtctttgacaccgatcagtctccagaatggc
tttgccgggcttcacaaatcccgtattccggacgccgcagtacgtggatacatgttccag
tccgccgtagaacgtcttgtaacttggtggatcgacttcttcaccgtgcttcccaccggt
catattcgcagccgcatctttgaagaggttcaagaggagctagcacgaaatgaagccatg
cggaaggctgacaggaagggcaaggggcgggtgagagacgtcgacgaggaggaggacaag
ggggaggttatccggaacgagaagagcttgatgaaacacgccctcatgcgcaagggctcg
cgtgacacgagtgctcagctgttcaccgcgctatgcagagcccttggaatccctgcacgg
cttgtcgtgagcctgcagagcgtgccatggcaggcgaaggttggccagccaaagccgtcg
ccgaaaaaagataagaagaaggataccaaagggaagcagaaggcgacccaagatgacgac
gatgaaggcgacatggaacaggtggacattccaactccgggcaaggcatttctggggaat
ggtcaacgcctcgacggaagcagcacccctgccggctcagataagggaaaacagaaagct
cctccggttatcaatctgcgtaagagcaaaggtcgcaaattgggctctgcgccgatcaag
ccaccgaagaagcgtgatcgcacgcccgacccgacgagatctgcacccgtcttttggact
gaggttttctcacgagctgacgcaaagtggctgcctgtagacccagtgcggggatatgtc
aacaagcgaggcgcgttcgacccttctttgcccatcaacagtccgcaaggcacaagggta
gaaaatcgcatggtttacgtcgtcgcatttgaggaagatggctattcaagagatgtcact
ccccgttatgcgaaggaatacggcgccaaggttacaaagatgcagcagggtggcaagggc
aagaaggagtggtgggagagtgtcatgcgtatcattacgaggccgttcagattgaatcga
gatgacctggaagatgaagaactacaaaccaaccagctcacagagaagatgccggaaact
atggcaggcttcaagaaccatccgctgtatgtcctcgaaagacaccttaggcgcgatgag
gttgtttatcctctcgttgagcttggaaaattccgcggcgagtcggtgtacccgcgtgcg
aacgtgctagcgctcaaggcggctgagaactggatgaggcagggacgcaaggtccgcgaa
ggatgtcagcccatgaagtgggtaaagcagaacgctgtcactgtgaataaacggcgcgca
gtcgagatggcattggccgagcgcgaccgcttgcctattgcgggcgagggcgagggcttc
tcgagcgagaaggacatcatgcagggtttgtacgcgcagagtcagaccgaactatatgtt
ccagatcctgtcgttgatggcaaaatcccgaagaacgacttcgggaacattgatctctac
gtgccaaccatgcttccagctggcgccgcatatattcctcataaaggcgcagcgaaggta
gctctacagcttggattcgatcatgctgaggctgtaaccgggttcgagttcaaaaaacgt
cgcgcattcccagtcatcactggtattgtcgtcgccgccgagaatgaacaggccgttctc
gaggcgtattgggaagccgagcaagaggcggagaagaagcggcggacgaaggagcaggag
caagtcatcaaacgatggcaacgcctcattcaaggtttgcgtgtgcgccagcgagtccaa
gagcagtacgccggtcccggcgagccgcggcatgcagctagcggacccacaccagaaaac
caggcacaggagactcaagaggcaggcgggttcttaactaccgcagacgatgtcgtcaag
ccgtacacgctaccgcgtaattttcacgaagtgcttccagaacacgctgtcgtttccgat
aaaaccgaggtcagggctgaaagctcaggaaatactcgtgacgaagtcaatgtaataacg
cctcggtcgccgtcgcagcttacattggagacatacgacatcgaagaagatgatgaacca
cttgaagaagtgcaggtacccgagacgcatacgccagttgggggcgtgattaagagcatg
gccgagctagcggcagcgcacactcatgtgcaggagaacaccgcagacgcgtccgcagta
gagacactaccggtgcctgccgttcatattgccaccccgagagtgaatattaggccgagc
cgcggtgggacaagcacccctgcgaagacgaatggcgaggcggcgaacaggaagacttcc
aatgggagaccttccaccggaaagcagcccgcccggcgcgggcgtaagcgcgggcgggac
gacgacgacggctctgccgagtccgaggcagacgagccggtgcgagcctcaccagtcaag
cgagcacgcacagctgctgcacccccagtaaagtcagatcgtgtgttacgttcacgcaaa
gggaagaccgaagcacagatacatgtggagcgcgaggaagaggaggcgttccgaagggcg
gtcgcgaagtaa
DBGET
integrated database retrieval system
