Phanerochaete carnosa: PHACADRAFT_185111
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Entry
PHACADRAFT_185111 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pco
Phanerochaete carnosa
Pathway
pco03022
Basal transcription factors
pco03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PHACADRAFT_185111
09124 Replication and repair
03420 Nucleotide excision repair
PHACADRAFT_185111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pco03021
]
PHACADRAFT_185111
03400 DNA repair and recombination proteins [BR:
pco03400
]
PHACADRAFT_185111
Transcription machinery [BR:
pco03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PHACADRAFT_185111
DNA repair and recombination proteins [BR:
pco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PHACADRAFT_185111
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
IBR
Tfb4
Motif
Other DBs
NCBI-GeneID:
18910260
NCBI-ProteinID:
XP_007396848
JGI:
Phaca1_185111
UniProt:
K5WUK9
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MPPRRTNDDYMGGQSDSDVSMLDEDELTSRVKAKGKGKATEGRKGDKGKSKVKEQPYAWE
ASYTRTWETVQEDEAGSLHTAVRDLIAKGRRRRLLAPAEAVRRTIIRHLILVLDLSSSMM
DRDMRPTRFDLMLQYAREFIAEWFDQNPLGQIGIVGMRGGIGERIGEMSGNPQDVLRSIA
ERHKLEPVGEPSLQNAIEMARSSMSHLPTNSSREITIIFGSLTTCDPGNIHDTLDECVKD
KIRISLVALAAEMKICRELCVKTGGQFGVALNEGHFKDLLFELIPPPAQRALTRANGPGA
ANPAADLIMMGFPTRLPVTSQPSLCVCHGELKSEGFLCPRCLAKVCDVPTDCDICGLMIV
SSPHLARSYHHLFPVKPYTPITNLDDATSLSATCYGCSVPFQEKVLQPNVPLVDGISPLG
RYRCPECEHDFCTECDVFIHDVLHCCPGCGK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcccccaagacggacgaatgatgactacatgggcggacagtctgattcggacgtgtcc
atgctcgacgaggacgagctgacctctcgtgtaaaggctaaaggtaagggcaaggcaaca
gaaggccgcaaaggcgacaaggggaagagcaaggttaaagagcaaccctacgcttgggag
gcatcctatacgcggacatgggagaccgtacaagaggatgaggcaggcagcttgcacact
gcagtgcgagatctcattgccaaggggagacgaagaagactgctagctcccgcggaagct
gttcgcagaactatcatacgacatctcatcctggtcttggatctatcttcgtctatgatg
gaccgagacatgcgtccgacacgcttcgatctcatgcttcagtatgctcgtgaattcatc
gccgagtggtttgaccagaaccccctcggtcaaatagggattgtcggtatgcggggcggc
atcggcgaacggataggtgaaatgtctgggaaccctcaggacgtcctgaggtcgattgcc
gaacggcacaaactggagcctgtaggtgaacctagtctacaaaatgccattgagatggct
cggagtagtatgagccacctaccgaccaattcttctcgagaaataaccatcatcttcggg
tctctaacgacttgtgatccggggaatatccatgacaccttggatgaatgtgtcaaggat
aaaatacgaatatctttggttgctcttgccgcagaaatgaaaatttgccgtgagctttgc
gtcaaaactggtggtcagttcggcgtcgccctaaacgaaggacacttcaaggaccttctc
tttgaattgatccctccacctgcccagcgcgcccttacacgcgcaaacggccctggggcc
gcgaacccggctgctgacctgataatgatggggttcccaacccgattaccggttacgtcc
caaccgagtctctgcgtatgccacggcgaactcaaaagcgagggcttcctctgtcccagg
tgtctggctaaagtctgcgacgtgccgacggattgcgacatatgcggccttatgatcgtc
agctcaccccatctagcgcgaagctaccaccatctcttccctgtcaagccgtatactccc
attacgaatcttgatgatgctacaagtctaagcgcaacctgctacggctgctcagttcca
ttccaagagaaagtactgcagccgaatgtcccccttgtcgatggtatcagccccttaggt
cgatatcgctgtccagaatgcgagcacgacttctgtacagagtgtgatgtctttatccat
gatgtccttcactgctgtccggggtgcggcaagtaa
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integrated database retrieval system
