Phanerochaete carnosa: PHACADRAFT_193443
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Entry
PHACADRAFT_193443 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pco
Phanerochaete carnosa
Pathway
pco03420
Nucleotide excision repair
pco03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PHACADRAFT_193443
03430 Mismatch repair
PHACADRAFT_193443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pco03400
]
PHACADRAFT_193443
Enzymes [BR:
pco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PHACADRAFT_193443
DNA repair and recombination proteins [BR:
pco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PHACADRAFT_193443
MMR (mismatch excision repair)
Other MMR factors
PHACADRAFT_193443
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
AAA_12
Motif
Other DBs
NCBI-GeneID:
18910906
NCBI-ProteinID:
XP_007393640
JGI:
Phaca1_193443
UniProt:
K5V6K6
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
MSIAHLDGLNEVQLRAAQHPPHVPLQILAGPGSGKTKVLTSRIVHLINVHAISASNICAV
TFTNKAALEMRTRLGRMLDKEHVRQIKMGTFHALCAQFLRRYATLVGISGNFTVCDADES
KKIVGKMLKEPDLKEFLKRCSITLSEGTISSRISQAKAKGLSPHDLLDSFHASSHTSSKG
KVKEKSFFALTTEHLEHELKSCNIKETIDFVVANLYANYELILRDHNALDFDDLLVYGVR
LFSENPQVGRWCTHVLVDEFQDTNNVQYELMRSLAAASRSITVVGDPDQSIYGWRSAEVE
NLAKMRRDFAATQQIFLEDNYRSTGSILAVSVAIVAQDKSRIQKTLHATHPQGPQPTLHC
FPSDRVESSAIAGEIKRVVAHMGGTLGYDDCAILLRYNSLSRVFESAFRKEGVPTRILGG
QRFFERAEVKDVLAYLQIVDNPAYAPAFARVINVPQRGIGQKTIAELLTVAGKKGLSPLE
VVERIHGGRIPDIKPPIKRKVAEFVHVLKDMRKLALKGLSPANLIRRFLDLVQYQEYLEK
TQEDADSRWRNVQELITFASEMESELGAQSFDVDVEDTKAAQEDDYWQDREEDEYDDEEL
DDLGFAEVKPRDDKQARKGTESRDAAANTPLRAFLQASMLSTDTGQSSEDDKDKQKVTIT
TCHAAKGLEWPVVFIPVVEEGVFPSARAEDPEEERRLLYVACTRAQALLYLTHASSRMMA
GETVSKRLSEFVSVLPGVPPPVGIPDSAALFSSSPPELSKAEITTLAKVLHRATPDAAEV
QKRVAELNRVGKSSFWTADPESTYNTGFSSAASWNKGTPVHRSYQAECPSPDAPTFVSAK
TMSFKPPSRPVYRHAQPARPLSPSKELNALSPSAISTFPMVNDRGEKPISENAAPRGRAK
AAKEPSGGPKQPSIESFVQRKETGVVRPMSKTVAGVLVSMARSAPKVPSTASRPTHARSP
SPSQVKPAVPALTSSGSSSPALPSAPEKSPSTAQQSQQPTGAAASKRRLGMGRATGGYPN
KKFKAPASGA
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatcgctcaccttgacgggctcaacgaagtccaactcagagccgcccagcacccg
ccgcacgtacctctccaaatcctagcggggcctggcagcggcaagacgaaagttctcacc
tcccgtatcgtccatctcatcaatgtgcatgcaatatctgcttcgaatatatgcgctgta
acgttcaccaacaaggctgcgctggagatgcgcacgcgcctcgggaggatgctggataag
gagcatgtccggcagatcaagatggggacttttcatgcactctgcgcacaatttttgagg
aggtatgctacgcttgtgggtataagtgggaattttacggtatgcgatgcggatgagagc
aagaagatcgtaggcaagatgctgaaagagccggacttgaaggagttcctgaagagatgc
tcgattacactgagcgaagggacaatctcgtcccgcatatcacaagccaaggccaaaggc
ctctctccacacgaccttctggactcatttcacgcctcctcccatacctcatccaagggc
aaagtaaaggaaaagtccttttttgccctcacaacggagcatttggaacatgagctcaaa
tcgtgcaatatcaaggaaacaatcgatttcgtggtggcgaatctatatgcaaactatgag
ctcatcctaagagaccacaatgccctcgacttcgatgacctgctcgtatatggtgtgcgt
ctcttctctgaaaatccacaagtcgggcgctggtgtacgcatgttctcgtcgatgagttc
caggataccaacaatgtccaatatgaactcatgcgaagccttgctgcggccagtcgtagc
atcactgttgtcggtgacccggaccagtccatctacggctggcgctctgccgaagtcgaa
aatcttgcaaaaatgcgtcgtgactttgcggcgactcagcaaatctttctcgaagacaat
taccggagtaccggttctatcctggcagtaagcgtggcaatcgttgcgcaggacaaatcc
cgcatccagaagacactgcatgcaacgcatccacaagggccccagccaacgctacattgt
tttccttctgaccgggtggagtctagtgcaatcgcgggcgaaatcaagcgtgttgtcgcg
catatgggtggaacacttggatacgatgactgcgccatccttctacgatacaactccctt
tctcgcgtatttgagagtgccttccgcaaagagggtgtcccaacacgcatcctcggcggg
caacgtttcttcgagcgcgctgaagtcaaggacgtacttgcatacctccagatcgtggat
aaccctgcgtatgcacccgcatttgcgagggtgataaacgtgccgcagcgtggcatcggc
cagaagaccatcgcggagcttctgactgtcgcaggcaagaaagggttgtcaccgctcgag
gtcgtggagcgcatacatggagggcgcatacctgacatcaagccgcctatcaaacgcaag
gtcgctgagttcgtgcatgttttgaaggacatgcgtaagctcgcgctaaagggattatct
cctgcaaacttgatccgtcgcttccttgatctcgtgcaataccaagaataccttgagaag
acgcaggaggatgctgatagccggtggcgaaacgtgcaggagctcataacttttgcgagc
gagatggagagcgaactcggcgcccagagcttcgatgtcgatgttgaggatacgaaagcg
gcacaggaagacgactactggcaagaccgagaagaggacgaatacgacgatgaagagctt
gatgatctgggatttgctgaggttaaacctagagatgataagcaggcgagaaagggtacg
gagagtagagatgctgcggcgaacacaccccttcgtgccttcctgcaagcgtcgatgcta
tccacggacacaggtcaatctagcgaagacgacaaggataagcagaaagtcaccatcacg
acttgtcatgcggccaagggactcgaatggcccgttgtcttcatccccgttgtcgaggaa
ggtgtgttcccgtctgcgcgtgcagaggacccagaggaggaacgccgtctactctacgtt
gcatgcacgcgcgcccaagctctcctgtatctcactcacgcatcttcgcgcatgatggct
ggcgagacggtatcgaaacggctctcagagttcgtcagcgtactccctggcgtccctccg
cccgttggcattccagactctgcggctttattctcgagtagtccgccagaactatcgaaa
gcggagatcacgacgctcgcgaaagtgctgcacagggcgaccccggacgctgcagaggta
cagaagagagtagcggagcttaatcgagtgggaaagtcctcgttttggactgccgatcca
gaatccacctacaacaccggcttctcttctgcagcttcctggaataaaggcacacctgta
caccggtcgtatcaggccgagtgtccttcgccggacgccccgacattcgtctctgcaaag
acgatgtccttcaagccgccgtctcgaccagtttaccggcatgctcaacccgcgcggccg
ctctcgccctcgaaagaactgaacgcgttatcgcctagtgctatatctacgttccctatg
gtcaatgatcggggcgaaaaaccgatatcagagaatgcggcgccgagaggaagagcaaag
gcggcgaaggagccgtcaggggggccaaaacagccatccatcgagtcattcgtgcaacgc
aaggagacgggcgtagttcggccgatgtcaaaaaccgtagctggagtcctggtatccatg
gctcgctctgcgcccaaggtcccttctacagcctcacggcctacacatgcccgatctcca
tctccgtctcaggttaagccagcggtccctgcattaacttcttccggttcgagcagccct
gctctgccttccgcccccgaaaagtcgccatcaacggctcagcagtcccagcagccgacc
ggagctgctgcaagcaagcggcgcttggggatgggacgggcgacgggtggttatccgaac
aagaagtttaaggctcctgctagcggagcctag
DBGET
integrated database retrieval system
