Phanerochaete carnosa: PHACADRAFT_196658
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Entry
PHACADRAFT_196658 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K18722
nucleoporin NUP2
Organism
pco
Phanerochaete carnosa
Pathway
pco03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PHACADRAFT_196658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pco03019
]
PHACADRAFT_196658
Messenger RNA biogenesis [BR:
pco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PHACADRAFT_196658
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP50
Ran_BP1
EVH1_PP4R3
Motif
Other DBs
NCBI-GeneID:
18911165
NCBI-ProteinID:
XP_007396926
JGI:
Phaca1_196658
UniProt:
K5WUT3
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MKRGAEKQLTKDVEDIDDDEVVESGQGLKKADDNMLANRKIRGLPKRATAGLASGSAPTL
AAVPSKFAGFAGFGTAATGTSSYSFTALSKPAESPAPAGDSFMFNSSTSSNTPPVTSTST
AVPVMSSTASSAAKTFASFLGSAADSRATGPRSTNGVHGQNGAAPDDDKLKAETKYYRSL
RGLNVSFVDAITKAVDSDPFLDLATVQEQYKSLRSKVREEYEQDVKKVSPSTTSAAASPS
TTSALTFGTKAAPTAPTPPAASSSPFSFGAKLAAPSSSEDQSSPAMPAPPTSFAGFTPPA
ASSSTAYMAGGFKPSIDLTKTSSFTFGSTSAIGNNSVAATPKPAFTFGAPSSSSSTFTSF
SSNKPTGASSAAPPSIFSSNLFTTSTADSSKEMEAEKPSTSSSVFGAGLAFGSDKDKPSL
TSTPTKSSFSFGTPPSTSKSLPFTFGTAGSIGNPVGFGFGSPPKTPETEPKPATSTSKFA
GFSFGALPPAPAKSAETSEAGEGTDSSRAETPAEETPPLLVQTSVHDLAGEGEEDEETKY
EVRTKVYRMIKKNSGQSEWTDVGIGMLRVNAHKETGQRRLLLRNSSTGKITINFNVYKGM
NPTVAKNVVSFIGHDDEKSVPFKLRVKTNEQADDLKKALDREIEFVKAKASE
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgaggcgcagagaaacagctgacaaaggacgtcgaagacattgacgacgatgag
gtggtcgagtccggacagggccttaagaaagcagacgataatatgctcgcgaacagaaaa
atcagggggctacccaagcgggcgactgctggcctggcgtccggatccgcacctacactc
gctgctgtgccatctaaatttgctggttttgctggttttggcaccgcagctaccggcacg
tcatcttactccttcaccgctctgtcaaaacctgctgaatctcctgctccagcgggcgat
tcattcatgttcaactcttcaacaagttccaacacgcctcctgtaacgtcaacgtcaaca
gcagtaccggtcatgtcatctacggcgagtagcgcagcgaagacatttgcctccttcctc
gggagtgccgccgattcgagggccaccggacccagatccaccaatggcgtccacgggcag
aacggcgcagcgccggatgatgataaactcaaggcggagaccaagtactaccgttctctt
cgcggtcttaatgtgtcattcgtggatgcaattaccaaggctgtggattcggatccgttc
ctcgatcttgcaaccgtgcaagagcaatacaaatccctgcggtcgaaagtcagagaggag
tacgagcaagatgtcaagaaagtttctccatcgacgacatcggccgcagcatcaccaagc
accacgtcggccttgacattcggaaccaaggccgcgccaacggcgccgacgcccccagct
gcatcgagcagtccattcagctttggggcgaaactggctgcgccctcgagttcagaggac
caatcttcacctgccatgcctgccccaccaacaagtttcgctgggttcactcccccagcg
gcttcctcttccaccgcatacatggccggaggcttcaaacctagcatagatctaaccaag
acatcttcctttacctttggctcgacttccgccattggaaacaactccgtggctgcgaca
cccaagcccgccttcacgttcggcgcgccttcatcatcatcttccaccttcacctccttc
tcgtctaacaagccgaccggtgcttcgtccgctgctcctccatctatcttctctagcaac
ctttttaccacgtcgacagccgacagctcgaaggagatggaagcggagaaaccttccacg
tcgagcagcgtcttcggtgctggcctggcattcggttcggacaaggacaaaccgtcactg
acatcgactcctacgaagagtagctttagctttggtactccgccgtccacgtccaagtcc
ctgccgttcacctttggcacggcaggcagcataggcaaccctgtcggcttcggcttcggg
agcccacccaagacgcctgaaacagagcccaagcccgccacgtcgacttctaagttcgcg
ggcttttcgtttggtgcgctgccccccgcaccggctaagtcggctgagacgtcggaagcg
ggcgagggtactgactcgtcgagagcggaaacccctgcagaggagaccccgcctttgctc
gttcagacgtctgtgcacgatctggcaggcgagggcgaagaagatgaggagacgaagtac
gaagtgcggacgaaggtttaccgtatgatcaagaagaatagtgggcagtctgaatggacc
gacgtcggcatcggtatgctgagagtcaatgcccacaaggagactggtcaacgccgtcta
ctgctccgaaatagcagtacgggcaagattactatcaacttcaacgtctacaaaggcatg
aacccgacggttgccaagaacgttgtatcattcatcggccacgacgacgagaaatcggtg
ccattcaagcttcgagtcaagaccaatgagcaggctgacgacctgaagaaggctctcgac
cgggagattgagttcgtcaaggcgaaggcgtccgagtaa
DBGET
integrated database retrieval system
