Phanerochaete carnosa: PHACADRAFT_196818
Help
Entry
PHACADRAFT_196818 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
pco
Phanerochaete carnosa
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pco01009
]
PHACADRAFT_196818
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pco03019
]
PHACADRAFT_196818
04131 Membrane trafficking [BR:
pco04131
]
PHACADRAFT_196818
03036 Chromosome and associated proteins [BR:
pco03036
]
PHACADRAFT_196818
Enzymes [BR:
pco01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
PHACADRAFT_196818
Protein phosphatases and associated proteins [BR:
pco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
PHACADRAFT_196818
Messenger RNA biogenesis [BR:
pco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
PHACADRAFT_196818
Membrane trafficking [BR:
pco04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
PHACADRAFT_196818
Chromosome and associated proteins [BR:
pco03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
PHACADRAFT_196818
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Arb2-like
Arb2
Motif
Other DBs
NCBI-GeneID:
18911176
NCBI-ProteinID:
XP_007397084
JGI:
Phaca1_196818
UniProt:
K5W5I8
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MDVDVPSAKPASAAHKRAKAVTSERRASSLPPKNPRPTLPVVGYVYDSRMMGHSCISGHP
EQPERIKRIFDAFRDAGLISKMRKIPIREAERDEVLMVHSETLWDKVMAVGDMSTQDIVD
SEQYYQDLSLYVSPSTPEAARLSCGGVIEVAMAIVRGDVEKAFAIVRPPGHHSEPDEHMG
FCFFNNVAVAIKVIQMWPAFKKIMILDWDVHHGNGTQKAFYDDPDVLYVSLHRYENGQFY
PNGPFGSLKSCGDGPGLGCSVNIPWPTKGMGDADYIYAFQRIVMPIAMEFAPDLVIISAG
FDAAKGDDLGECEVTPAGYAHMTHMLAGLARGKMLVALEGGYCLDAISSSATAVAKVLVG
EAPPELPPMVASDIATETIYQVAVEQSKYWKCMDPKAVEPQEELQELAVSIPELLKAHRQ
NYLFKTHKMLQVPFVTQELTDRFFSQVTCTPDIMDNETLVVFVHEFGNLRVELESVLMCN
PREEHSYMVDFSRQLIEQVVGAGHALLDVNLYPKPVAQQTRRRHHDGKEDWSTDVMTYLW
DNYIQLTNARKVALIGHGPGCAGIIDLLQNRSANCVRHVQAVVQVVGNYTVPGVPRELPE
HSMVVLPKEHRAIQDQQKFTKRHGKIVISDESKPILLITKHLPSILHFVQKRLGNTESKE
NQENQSNGA
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggatgtagacgtaccgagcgcaaagcctgcgtcagcggcgcacaaacgtgccaaggca
gttacgtccgagcggcgagcctcctccctgccgccgaagaacccgcggccgacccttccg
gttgtaggttacgtctacgactcgcgtatgatgggccacagttgcattagtggacatcca
gagcagccggagcgcatcaaacgcatattcgacgcgtttcgagacgcagggctcatctct
aagatgagaaagatacccatccgcgaggccgaacgcgatgaggtcctcatggtccacagc
gaaaccctttgggacaaggtcatggctgtgggtgacatgagcactcaggacatcgtggat
tcggagcagtattatcaggatctctctctctacgtcagcccgagcacccccgaggcagcg
cgactcagctgcggaggggttatcgaagtcgctatggccatcgtccgcggtgatgtggag
aaggcatttgctatcgttcgtccacccggtcaccactcagagccggacgaacacatgggc
ttctgcttcttcaacaatgttgcagtggcaataaaggtgatacagatgtggccggctttc
aagaaaattatgattcttgactgggacgtgcaccatggaaatggtacgcagaaggcgttc
tatgatgaccctgacgtgctctatgtttctctacatcgttacgagaacggccagttttac
cccaatgggccgttcggaagccttaagtcctgtggagatggcccgggactcggctgctcc
gtaaatataccatggccaacaaagggcatgggtgatgctgactatatctacgcttttcaa
aggatcgtcatgccgatcgccatggaattcgcacctgacctcgttatcatttccgcgggc
tttgacgcggcgaaaggagacgatctcggcgaatgcgaggtaacgcccgctggctatgcc
catatgacacacatgcttgcaggccttgcacggggaaagatgctcgtggccctcgaggga
ggctattgcctggacgcgatctcgagctccgctacggctgttgcaaaggtgctagtgggc
gaagcacccccagagctgccgcctatggtggcctcggatatcgctacagagaccatctac
caagtggcagtggaacagagcaagtactggaaatgcatggatcccaaggctgtcgagcct
caagaagagcttcaggaacttgcagtgtcgataccagagctgctgaaggcgcaccgccag
aattatttattcaagactcacaagatgctccaggtaccgttcgtcacacaagagttgaca
gaccggttcttctcgcaagtcacttgcacacccgatattatggataacgagacgctggta
gttttcgtgcatgagtttggtaatttgcgcgtggagctagaatctgtgctgatgtgcaac
cctcgtgaggaacattcatacatggtcgatttcagcagacagcttatagaacaggttgtt
ggcgcgggccatgcgctgctcgatgtcaacctttaccccaagcccgtggcgcagcagact
agaaggcgtcatcatgacggcaaggaggattggtcaacggacgtcatgacatatctctgg
gataactatatccaattgaccaatgcccgaaaggtcgccctaattggccatggtcccggc
tgtgccggaattatcgaccttctgcagaaccgctccgccaactgtgtgcgacacgtacaa
gccgttgtgcaagtcgtgggcaactacaccgtcccaggtgtgccgcgggagctgcccgag
cactcgatggtcgtgcttccgaaagagcacagagcgattcaggatcagcagaagtttaca
aagaggcacggcaagattgttatctcagacgagtcgaaacccatactgctgatcacgaag
cacctacctagcatactgcacttcgtgcagaagcggctaggtaatactgagagcaaggag
aaccaggagaaccagtccaacggtgcatag
DBGET
integrated database retrieval system
