Phanerochaete carnosa: PHACADRAFT_199007 Help Entry PHACADRAFT_199007 CDS       T03128                                  Name (RefSeq) hypothetical protein   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism pco  Phanerochaete carnosa Brite KEGG Orthology (KO) [BR:pco00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pco03021]     PHACADRAFT_199007 Enzymes [BR:pco01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      PHACADRAFT_199007     5.6.2.5  RNA 5'-3' helicase      PHACADRAFT_199007 Transcription machinery [BR:pco03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      PHACADRAFT_199007 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SEN1_N AAA_11 AAA_12 SEN1_barrel AAA_30 AAA_19 Viral_helicase1 UvrD-helicase DUF4600 CyRPA nSTAND3 ResIII AAA_16 TMF_TATA_bd Motif Other DBs NCBI-GeneID:  18911388 NCBI-ProteinID:  XP_007399310 JGI:  Phaca1_199007 UniProt:  K5VJI2 LinkDB All DBs Position Unknown AA seq 1989 aa AA seqDB search MEISANNGVSKKLKEFRDTPVAHPSNQDLYAIFNFLVLENSPAAGQIHWFCAQARPLVTE AASFLLRLHAYNSPLVVQWRAKLQACLAGCSQCVGRLPVIKDQSQRTYLEKIEHKTLQQF WDSFAVWELEIALKYCEQSNLLPIATGTSSSSSDNSATLLNVPPSIVLLMLSNLQILRDP RTFSLIRTLSPDRPISAWPLDSPPAGLLLLLMDEDKGVRTWAYQQVARYTTTPMPLECFI QSHVEVLVATVAAVSSSNLNAEPQSWSPDFSFSRDPLILWSGYATMLRFVPPERMGANIA HKADLRKAIVTHLSDTGTHFFEVLKVFILLLPGLGPELWQGESENYPLHVFNIIKNNRFY ASSLEPDRPEHGHGSVQWIEAYVKSLGELPALRILIPPVIQYLCEELQHERYKDLRASAV CVAAKLLDTFLAKASQDLSAEISPLLSAVLEPLDIHANVFTSVAFGKSYVGDVWAEARCV ARSLIRTSLRMDVGLIFGTIRCLAATSSNTKSVASSTIHEQIWRRMYELVLPDDSDGIAM IITVLSDIAHVDDLHEGAFGAIFGNNTNKDDFMKAVHGVNLALEVMRTGFSDSVSRYLDF TEPRDALAFLRQYHIVGQVTTIMFSPVAVLRQPVQSLIGFALDAESRADCFRALLELDPD RVFEGMYRALQNFTKSTTTMPEACNLSKALALCLTDVIDVLSSSSDGLLHRTNFLQSFKQ AGPEVQLPKWWSLMCQALTHIFQRTPRWADYFENGMMVTWMRDALIFGRDMLAQRKLIES GALALSPQSLANRGKSHIGSKMVDGLQAVLLELTRWLRLTDEELLFQAFALLQSMLACFQ EAKVKPSDAALQKLQKHIKEARTRDPKRPLTRLDSTRVDRLQDAISMFEDKDGSDDEIQI IAHRVVEPVERRKRKDKAEEKVKAELKPVSVSASVFSRKAKTPFSKSFRPEPARRPSGKA GISSYFTADDRKKLNAAASMSKFSKSTAATTSKPPAAAASKPVRERVDDAKSDASSFGGS AAPTSTAPSSDESDSDGGEESGLAALAKLQKTPTIKKAPERRQVMMLDLPGTVSNPALER LNQRSARDEARRTALRLKPDITPLHRTMLSWNYDHDGSDPPGERLNLVPVPDSFKDEQHY RRVFEPLLLSECWAQIQSSKTDTKKEERYACTIVIRQYSGEDWIDLDIAITDSVHKEWTL TDADLVLLKHFDGKKSVMCKVQNYRSTPMNANATLRMVASQDGPGPQTGSSWMISKITSL TTIHREYSSLMALPYYDLCPAILDANLLQSARANLDDVNQTMKAYNLNEPQANAILSALR TAGFSLIQGPPGTGKTSTICGLVQAFLAKRGRTATAIHAGRNSGPADKEPKKKILLCAPS NAAIDEITYRLKEGISGPGRQLVIPKVVRTGGGKVGLSVRDVTLDYLVEQKMNTGGQAKA NSQDVGSEIALLRSKLEAVKHNREAKRTELLTVHDNTARTMQLEDTIRALNKERTALTSQ LDKLRDQQKSNNRTFDAVSRKFRAEILQDADVICTTLAGSGHDTLEPYEFEMVVIDEAAQ AVELSSLIPLKYRCQRCVMVGDPQQLPPTVQSQQATGFSYNQSLFVRLQKHHPEAVHLLS IQYRMHPDISLLPSRLFYNGRLLDGPDMASKTQRPWHRHPKFGPYRFYNVHRGVETTASH SYLNQAEAEIAVALYNRLRQEFSAHDFDFKIGIVTMYKAQMLELRRAFERRFGTNIHGLV DFNTVDGFQGQEKEIIVLSCVRAGPGVERVGFLRDVRRMNVALTRAKSSIFILGNAATLE RSDEDWRTIVKDARERSCLVDVDVTYFTSAGSASIIKRAAPARSRVSSKQAAPLSSSPTF STPQELVASNQRPLASAVGAALEVKAELAPILAVPTQATPSKPSTALQSTSAEQNAIMTA QSGQKRPAEDNAAAEPEPKRRPPPPADGPRPPPKPKPPVKERKKPSIFMPSKRPAMAGDA GPSANRRRI NT seq 5970 nt NT seq  +upstreamnt  +downstreamnt atggaaatctcggcgaacaatggcgtatccaaaaagttaaaagagttccgtgatactcct gtcgctcacccgtccaatcaagacctgtacgccatattcaatttcctcgtcctcgagaac tctcccgctgcaggccagattcactggttctgtgctcaagcgcggcctcttgtaactgaa gctgcatcattcctactaaggctgcatgcatataacagcccgcttgtagtgcagtggcga gcgaagctgcaagcctgcctggcgggttgttcgcaatgtgtagggcgattgccggttatc aaggatcagtctcagcgcacatacttagagaagattgaacataagacgctacagcaattc tgggatagtttcgccgtatgggagctcgaaattgctctgaaatactgcgaacagtccaac ctcctacctattgccactggcactagctcctcctcctctgataactctgcgacactcctt aacgtcccaccttccatcgtcttgctgatgctgtccaaccttcaaatcctccgagatcca cgaaccttttctcttatccgcacactctctccggaccgacctatatctgcatggccgttg gattcgcctcctgccggactgttattgctactaatggatgaagataaaggtgtgcggacc tgggcctaccaacaagtcgctcggtacactaccacgccaatgcctctcgaatgcttcatt caatcccacgttgaggtactcgtggctactgtggctgctgtcagctcctccaacctcaac gccgaacctcaatcttggagtcctgatttctccttctcccgcgatcctctcatcctctgg tctgggtatgctaccatgttgcgctttgttccaccagagagaatgggggcgaatatcgcc cacaaggctgacctgaggaaagctattgtgacgcatctatcagatacgggaacccacttc ttcgaggttttgaaagtcttcatacttctccttccagggttaggtcccgaactttggcag ggcgaaagcgagaactatcccctgcatgttttcaacatcatcaaaaacaaccgcttctac gccagctcgttagagcccgatcgaccggagcatggtcacgggtctgttcagtggatagaa gcatacgtcaaatcattgggcgagctgccggcacttcgaatcctgattccaccggtaata caatatctctgcgaagagttacagcatgaacgatacaaggatttacgtgcttccgctgta tgtgtagctgcgaagctactggacaccttcttggcgaaagcatcacaagacctgtctgca gagatttctccccttctttctgcagttctggagcccctcgatattcatgcaaatgtcttc acttctgtcgcattcggcaaatcatacgtcggcgatgtatgggcggaagcacgatgcgtc gcacggagcctcattaggacgtcgctaaggatggacgtcgggttgatcttcgggaccatc cggtgcttggctgcgacctcttccaacacgaagtcagtggcttcctcaacaattcacgag cagatatggcggaggatgtacgagctagttctcccagatgattcggacggcatcgcgatg atcattaccgtcctctctgatatcgctcatgttgatgacttgcatgagggcgcgttcggg gcaatcttcgggaacaatacgaacaaggacgacttcatgaaggccgtgcatggagtcaac cttgcattggaagttatgcgtacgggattctcggactctgtttctcgatatttggatttc accgaacctagagacgctctggccttccttcgccagtaccatatcgtgggacaagttacg accatcatgttctcacctgtcgcggttcttcggcagccggtccagtctctcatcggtttc gctctcgacgccgaatcccgtgctgactgtttccgtgcactgttagagctcgaccccgac cgagtcttcgagggcatgtatcgcgccctgcagaatttcacaaaatccacgacaacgatg cctgaagcgtgtaatctctccaaggcactcgcgctgtgcctcaccgatgtgatcgatgtc ttgtcctcttcgtccgacggactcctccaccgcacgaatttcctgcagtcgtttaagcag gccggtcctgaggtgcagctgccgaagtggtggagcctcatgtgccaggccttgacgcac atcttccagcgcacgccacggtgggcagattactttgagaacggaatgatggtcacttgg atgcgtgatgcactcatctttggacgggacatgcttgcgcagcggaagcttatcgagagc ggtgccttggccttgtcgccccaatcgttggccaaccgtggcaagtcgcatatcgggtct aagatggtggatggcctgcaagcagtcctactcgagcttacgaggtggcttcgacttacg gacgaagaactcctatttcaagcgttcgctctgcttcagtctatgcttgcgtgcttccaa gaagcgaaggtgaaaccaagcgacgctgcattgcagaagcttcagaaacatatcaaggaa gcgcgaacgcgtgaccctaagcgtccgctgacacgactggactcaacgcgcgtcgacaga ttgcaggacgcgatcagtatgttcgaggataaggacgggtctgacgacgaaatccagatc attgcacacagggtagtagaacccgtggaacgccgcaagcggaaggataaggccgaggag aaagtgaaggccgaactgaagcctgtgtctgtgtccgcatctgtattctctcgtaaggcc aagactcctttctctaaatcttttcgcccggagcctgcccgccgtccatcggggaaagcg ggtatcagtagctactttaccgccgacgatcgaaagaagctcaacgctgcagcgagcatg tcaaagttcagcaaatccacggcagccacgacgtcaaagccacctgccgccgccgcctct aagcctgttcgggagcgagtcgacgacgctaagtcggatgcttcgtcgtttggaggctca gctgcacccacctccacagcaccatctagcgacgaatccgacagcgatggcggtgaagag agcgggctggctgcccttgcgaagctgcagaagactcctacgatcaagaaggcaccggag cgcaggcaggtcatgatgctggacctgcctggcactgtaagcaatcctgctcttgaaagg ctgaatcagaggtccgcgcgagacgaggcacgccgtactgccctccgactcaagcccgac atcacacccttgcatcggaccatgctttcctggaattacgaccacgatggctccgatcca cccggagaaagactaaatttggtccccgtcccagatagcttcaaggacgaacagcactat cggcgcgtgtttgagccgttgctgcttagcgaatgctgggcacagatccagtcgtcgaag acggacaccaagaaggaggagcggtatgcgtgcactatcgtcatccgccagtacagcggc gaagattggatcgacctagacatcgcgatcacggatagtgtacacaaagaatggacgctc actgatgccgaccttgtactgctcaagcatttcgatgggaagaagagcgtcatgtgcaag gtgcagaactatcggtcaacgccgatgaatgccaatgccacgctgaggatggtggcttct caggatgggcctggtcctcagactggttcgtcttggatgataagcaagattactagcctc acaactattcaccgagagtactcttccctcatggccttgccgtattatgatctttgcccc gcgatactggacgcgaacctcctccaatcggcgagagcgaacttagacgacgtcaaccag accatgaaggcgtacaacctgaacgagccgcaagctaacgctattctaagtgcgctacgg accgctggattctctcttatccaagggcctcctgggacaggaaagacgtcgactatatgc ggactcgtgcaagcgttcttggctaagcgaggcagaacggccaccgctattcacgcaggg cgtaattccggcccggcagataaggaacccaagaagaagatcctcctttgcgcaccaagt aatgcggctatagacgagattacttaccgtctgaaagaaggtatctcgggtcccggtcgc cagcttgtcattccgaaggttgtccggacaggtggtggaaaagtcggtctttcagtacga gatgtcacgcttgattatctcgtagagcaaaagatgaacaccggcgggcaagcaaaggcg aattctcaggacgtcgggagtgagattgctctgctgcgttcgaaactggaagcagtgaaa cataatcgcgaagccaagcgtactgaacttttgactgtacatgacaacaccgcgaggacg atgcagctagaagatactattcgagctctcaacaaggagcggactgctctcacgtctcag ctggacaagctgcgggaccagcagaagtcgaataaccgtactttcgacgctgtcagcagg aaattccgcgcggagattttgcaagacgccgacgttatttgcacgacgctcgctggttcc ggtcatgacacgctcgagccttacgagttcgagatggttgtcattgatgaagctgctcag gcagtagaactgagttctttgattccgctgaagtatcgctgccaacgatgcgtcatggtt ggggatccgcaacagctaccccctacagttcaatcccagcaggccactggcttcagctat aatcagtcgttatttgtcagattacagaagcaccatccggaggccgtacatcttctcagc atccaatatcgtatgcacccagacattagtttactccctagtcggctcttctacaatggc aggctgttagacggcccagacatggcttcaaagacccaaaggccatggcaccgccatccg aaatttgggccgtatcgcttctacaacgttcatcgaggcgtcgaaacaaccgcctctcac tcatatctcaaccaagcggaagcagagattgcggttgcgttgtacaaccgcctgcgacag gaattcagcgcgcatgacttcgacttcaagattgggatagtcaccatgtacaaggctcaa atgctcgagctacgtcgtgcgttcgaacgtcgtttcgggacaaatatccatgggcttgtg gatttcaacaccgtggacggtttccaggggcaggaaaaagagattatcgtactctcttgc gttcgggccggacctggggtagagagggtcggattcttgcgagatgtgcggcgaatgaac gttgcattgactcgtgcgaagtcgtctatctttatcctcggcaatgcggctaccctggag agaagtgacgaagattggaggacaattgtcaaagatgctcgagaacgctcatgtcttgtt gacgttgatgtcacatacttcacgagtgctgggtctgcatcgatcattaagagggcagcc cctgcaagatcaagggtgtccagcaagcaagcggcgccattgtcatcatctcccactttt tcgacgccacaagaactagtagcttctaatcaacgtcccttagcatccgccgtgggggca gcgctggaagtcaaggctgaacttgcccctatcctcgcggtacctacccaagctactcct tcaaagccctcgacagctttgcagtcgaccagtgcagagcagaacgcgatcatgactgca caatctgggcagaaacgccccgcagaggacaatgccgctgcggagcctgagcctaaacgt agaccgcccccgcccgctgacggtcctcggccgccgccgaaacctaagccacccgtaaag gaaaggaagaaaccaagcatattcatgccttcaaaacgaccagctatggctggggatgca gggccatccgccaaccgacgccgtatatga

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