Phanerochaete carnosa: PHACADRAFT_200103
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Entry
PHACADRAFT_200103 CDS
T03128
Name
(RefSeq) hypothetical protein
KO
K12877
protein mago nashi
Organism
pco
Phanerochaete carnosa
Pathway
pco03013
Nucleocytoplasmic transport
pco03015
mRNA surveillance pathway
pco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PHACADRAFT_200103
09122 Translation
03013 Nucleocytoplasmic transport
PHACADRAFT_200103
03015 mRNA surveillance pathway
PHACADRAFT_200103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pco03019
]
PHACADRAFT_200103
03041 Spliceosome [BR:
pco03041
]
PHACADRAFT_200103
Messenger RNA biogenesis [BR:
pco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
PHACADRAFT_200103
Spliceosome [BR:
pco03041
]
Complex C
Other components
EJC/TREX
PHACADRAFT_200103
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
18911472
NCBI-ProteinID:
XP_007400429
JGI:
Phaca1_200103
UniProt:
K5VJ07
LinkDB
All DBs
Position
Unknown
AA seq
149 aa
AA seq
DB search
MSGYENDPFYLRYYTGHSGKHGHEFLEFEYSHGRLRYANNSNYRNDSLIRKEMWVGPLVV
KELKRIVEGSEITKEDDTNWPKKNIVGKQELEIRVGNDHISFETAKIGSLVDIQDSEDPE
GLRVFYYLVQDLKTLIFSLISLHFKIKPI
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atgtccggctacgaaaacgatccgttctacctgagatactacacagggcactctggcaag
cacggtcacgagttcctcgagttcgagtactcgcatggccgactgcggtatgcgaataac
tcgaactacaggaatgatagtctcatcaggaaagagatgtgggtgggcccgctggttgta
aaggaactgaagaggatcgtcgaaggcagcgagatcaccaaggaagacgacactaattgg
ccaaagaagaacatcgtgggcaagcaggagctggagattcgtgttggtaacgatcacatc
tccttcgagaccgcgaagatcggctcgctcgtcgacatccaggactcagaggatcctgaa
ggcttgcgcgtattctactacctcgtgcaagacctgaagactttgatcttctcgcttatt
tctctccatttcaagatcaagcccatatga
DBGET
integrated database retrieval system